| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2721 |
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| Symbol | |
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| ID | 4458950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3362760 |
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| End bp | 3363620 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639703492 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_846834 |
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| Protein GI | 116750147 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAAC CTGTTCAGAC CGAGCTTTAC GCCGTGATCG GCAACCCTGT CGCGCACAGT
CTGAGCCCGG TCATGATGAA CGCCGCCTTC AGGAGCATGA ACGTTCCCGC GACGTACCTG
GCTCTGCAGG CGGATGAACT GCCGGAGGAT CTGGAGACGC TGGCCCGGTT CGGATTTCGG
GGGTTGAGCG TGACTCTGCC CCACAAAGAG CTGGCCTACC GGTTGGCCGA TCACGTGGAC
GACATGGCGA GAACCATCGG CGCCGTGAAT ACCCTCATGA GGGAAGGCTC CGCCTGGATC
GGCTGCAATA CGGACTGGCT GGGCGCCACA AAGGCGCTGC GCCGGGTGAC CGAGCTCGAA
GGCAGGGAGG CGCTCATCCT CGGAGCCGGT GGAGCGGCTC GCGCCGTGGC TTTCGGGATG
AAGAGGGAAG GCGCCCGGGT GACCATTGCC AACCGGTGTG TCGAGAAGGG AAAGGCCCTC
GCCAAAAGCT TCCGATGTGA CTTCATTCCC CTCGCGATAT TGGATCGGGC GCGTTTTGAC
CGGCATTTCG ACGTGGTGGT TCAATGCACT TCGGTGGGAC TGCAGGGCAC GATCCCGACC
GTCCTGGTCA GCGACTCCTT TTTCGAGCCC GGAATGGTGG TCATGGAAAC CGTCTACCGC
CCATTACGAA CACCTTTTCT AAACGCTGCA AAACGGGCCG GCGCCACCAT CGTTCACGGC
ACCGACATGC TCGTCTACCA GGGGGTGGCC CAACTGGAAT GGTGGCTGTC GCGGCCCATC
CCGGAATTCC CTTGCGTGGC GGCCATGAAG CAAGCCATCC ACGAAGTTCT GTCAAAGGAA
AAGAATGCGC AAGACGATTG A
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| Protein sequence | MIKPVQTELY AVIGNPVAHS LSPVMMNAAF RSMNVPATYL ALQADELPED LETLARFGFR
GLSVTLPHKE LAYRLADHVD DMARTIGAVN TLMREGSAWI GCNTDWLGAT KALRRVTELE
GREALILGAG GAARAVAFGM KREGARVTIA NRCVEKGKAL AKSFRCDFIP LAILDRARFD
RHFDVVVQCT SVGLQGTIPT VLVSDSFFEP GMVVMETVYR PLRTPFLNAA KRAGATIVHG
TDMLVYQGVA QLEWWLSRPI PEFPCVAAMK QAIHEVLSKE KNAQDD
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