Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2720 |
Symbol | |
ID | 4458949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3361505 |
End bp | 3362776 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639703491 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_846833 |
Protein GI | 116750146 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCAAGA CGATTGAACC CATCTCGGGA ATCAAGGCGC AACTGTCCGT ACCCGGCTCG AAATCCATCA CGCATCGCGC CCTCATGCTC GCCGCCCTGG CCGATGACGA AAGCGAGATA CGAAACCCCC TGGTCGCCGA TGACACCACG ATCACGGCCG ATGCACTGGT GCAAATGGGG GTCGGTGTTC AGTGGAAGCC GGGAAGCGTC CTCGTCGCTC CCCCCTCCAA ACGCTGGTCG CAACCTTCGG AACCCATTCT GCTGGGCAAC AGCGGTACGA GTACGCGGCT CCTGCTGGCA CTTGCCGCCA CAGGAGTCGG GGATTTCACT TTCGACGGCG CCCCACGGCT GAGGCAACGT CCGGTGAAGC CTCTCGTCTC CGCCCTCGAA ATGCTCGGGG CACGGTTCGA CTGCACCGAA ACAGATGGAT TCCTGCCTCT GCGGGTGATT GCGCACGGAC TGTCGGGAGG CAAGGTCCTG GTCGACGCAC GCCAGAGCGG CCAGTTTCTT TCGGCCGTCC TGATGGCAGC GCCTTGCGCC GGGGGGGAAG TAACGGTAGA ATGGTTGGAG CCGGTGGCCT CCTATCCTTA TGTCGCCATG ACGCTGGCCA TGATGGGCGA ACGCGGCATC GATTTTCGCA AGGATCGCGC GAACCGGGTC ATCGTCCCCG CTCCTCAGAG GTATGCGGGC GGCAGGTGGA CCGTCGAAGC CGATTGCTCG TCCGCGTCCT ATCTGTGGGC GGCCGCCGCG CTGACCGGCG GGGATGTGCT CACCCATCCC CTCTCCCCGG ACAGCCTGCA GGGAGACTGC CGCTTCCTCG GAATCCTGGA ACGGATGGGG TGCCGTGTCA CCTGGGAGGA AGACGGAGTG CGCGTCGTTT CATCGGGTGA GCTGCGACCG GTGGACCTCG ATTTGAACGA AATGCCCGAT ATGGTGCCCA CGTTGGCGAT ATTGGCCGCT TTTGCAGGCG GGGTCAGTCG AATCCGCAAC GTGGCGCATC TGCGGGTGAA GGAGTCGGAC CGGCTACAGG CGGTTTCCTC GGAGCTGGGC AAGCTGGGGG TTCCGAACCG CGAGCTTCCG GACGGCCTGG AGATTCGTGG CGGCGCGGCA ACTTCGCCCA AAGTCGGCAT CGATCCGCAC GACGACCATC GAATTGCGAT GGCCTTCGCC GTGGCTGGGC TTCGTGTCGG GGGCGTGGAA ATCGAGGACG CGGAAGTCGT GGCCAAGTCT TTTCCGACCT TCTGGGAGAC TTTCGAAAAG TTGAAGTCAT GA
|
Protein sequence | MRKTIEPISG IKAQLSVPGS KSITHRALML AALADDESEI RNPLVADDTT ITADALVQMG VGVQWKPGSV LVAPPSKRWS QPSEPILLGN SGTSTRLLLA LAATGVGDFT FDGAPRLRQR PVKPLVSALE MLGARFDCTE TDGFLPLRVI AHGLSGGKVL VDARQSGQFL SAVLMAAPCA GGEVTVEWLE PVASYPYVAM TLAMMGERGI DFRKDRANRV IVPAPQRYAG GRWTVEADCS SASYLWAAAA LTGGDVLTHP LSPDSLQGDC RFLGILERMG CRVTWEEDGV RVVSSGELRP VDLDLNEMPD MVPTLAILAA FAGGVSRIRN VAHLRVKESD RLQAVSSELG KLGVPNRELP DGLEIRGGAA TSPKVGIDPH DDHRIAMAFA VAGLRVGGVE IEDAEVVAKS FPTFWETFEK LKS
|
| |