Gene Sfum_2715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2715 
Symbol 
ID4458979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3356301 
End bp3356855 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content60% 
IMG OID639703486 
ProductNADH ubiquinone oxidoreductase, 20 kDa subunit 
Protein accessionYP_846828 
Protein GI116750141 
COG category[C] Energy production and conversion 
COG ID[COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.720565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CAGCGAGCAA CAAAGTACGG TTGGCCACCG CCTGGTTCGG CGGGTGCGCC 
GGCTGCCATA TGAGTCTGTT GGACCTGGAC GAGCGCCTGA TCGACGTGGT TGGGCTGGTG
GACATCGTCT ACAGCCCGGT TGCTGACATC AAGGTGTTCC CGGAGGGGGT TGACGTGACC
CTTGTGGAAG GGGCCTGCTG CAATGACGAG AACGTACATC TGGCCCATGA AGTCCGGGAA
AGAAGCAAGA TCGTGATCGC CTTCGGCGAC TGCGCCGTGA CCGGGAACGT GCCCAGCATG
CGCAACCGCC TGGACCGGGA TCAGATGATC AACTCGGTCT ATTTCGAGGG CCCCGGCAAG
CCGCCTCCAA CATCCGTGCT GGGTCACTTC CTGCCGACCC TCATCCCCAA AGTGCTGCCT
TTGCACCAGG TCATTCCCGT TGACATTTTC CTGCCCGGAT GTCCCCCCGA TCCAGAGAGG
ATTTGGGCCG CCATCGTCGC TCTGCTCAAA GGGGAACCGG TATTGTTGCC TGAGGAGATG
AGAAGCTTCG GATAA
 
Protein sequence
MTTTASNKVR LATAWFGGCA GCHMSLLDLD ERLIDVVGLV DIVYSPVADI KVFPEGVDVT 
LVEGACCNDE NVHLAHEVRE RSKIVIAFGD CAVTGNVPSM RNRLDRDQMI NSVYFEGPGK
PPPTSVLGHF LPTLIPKVLP LHQVIPVDIF LPGCPPDPER IWAAIVALLK GEPVLLPEEM
RSFG