Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2656 |
Symbol | |
ID | 4459025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3284930 |
End bp | 3285610 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639703427 |
Product | two component transcriptional regulator |
Protein accession | YP_846769 |
Protein GI | 116750082 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.311089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.831438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCA GGGTTTTGAT CGTCGAGGAC GAACCCGCCA TCGTGGACAA TATCCAGTAT GCGCTTGAAA CGGAAGGGTT CGCCACGGTC TGCCTTGTCT CGGGAGAACC GGTGCTCACA TTTCTCGCCC GGGACACCGT GGACCTCATC ATCCTCGATA TCGGCCTGCC CGACATGAGC GGCATGGAAC TGTGCAAGGA AATCAGGAAG AGTCACTCGA CCCCCGTCAT CTTTCTCACC GCGCGGACGG ATGAAGTCGA TCGGGTGGTC GGCCTCGAGA TCGGGGCGGA TGACTATGTC ACCAAGCCCT TCAGCCCGCG CGAACTGTCC GCGAGAGTGC GGGCCGTGCT CCGCCGCACC CATGTCCGGG ATCATTGCGC CCCGACGCCT CACGTCTTTG AAGTCAACGA TTCGAAACGC CGGATCGCCT ACCACGGAAG AACCCTGGAC CTGTCCCGTT ATGAATACGA AATCCTCAAG ACGTTCATCC GGCGCCCGGG ACACATCTAT TCGCGGGACC AGCTCATGGA GCTCGTCTGG GAACAGCCGG AAACCAGTCT GGACCGAACC GTGGATGCGC ACATCAAGAA TATCCGCGCC AAACTGAGGG TCATCGCGCC GGAAAGCGAC CCCATCGTTA CTCATCGGGG AATGGGATAC TCACTGAGAG AGAACCTATG A
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Protein sequence | MKPRVLIVED EPAIVDNIQY ALETEGFATV CLVSGEPVLT FLARDTVDLI ILDIGLPDMS GMELCKEIRK SHSTPVIFLT ARTDEVDRVV GLEIGADDYV TKPFSPRELS ARVRAVLRRT HVRDHCAPTP HVFEVNDSKR RIAYHGRTLD LSRYEYEILK TFIRRPGHIY SRDQLMELVW EQPETSLDRT VDAHIKNIRA KLRVIAPESD PIVTHRGMGY SLRENL
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