Gene Sfum_2654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2654 
Symbol 
ID4459023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3283148 
End bp3284497 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content61% 
IMG OID639703425 
Producthypothetical protein 
Protein accessionYP_846767 
Protein GI116750080 
COG category[V] Defense mechanisms 
COG ID[COG4452] Inner membrane protein involved in colicin E2 resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.90394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAT TCTCCCTCAG GAGTTCCATC GTTTCCCGGA TGCTGATCGT GGCGGTGCTG 
GGAACGGTGC TCGTCATTCC GATCTCTCTT GTCACCGACC TCATCCAGGA CCGCCGGCAC
ACGCGCGCCG AGGCCGTCTC CGAAGTCACG GAGAAATGGG GCCGTCAACA AACGGTGACC
GGCCCCATTC TCACCATACC TGTGAAGCGC AAGCACAAAC TGAGCGACGG CACGATCAAG
CCCTACATCG TGCATGCGCA TTTCCTGCCG GACAGCCTCG ACTGCAACGC GGAACTCTCC
CCTTCGATCC GCTACCGAGG CATCTACAGG GTGGTGCTCT ACACCGCGGG GCTGCACCTG
GAGGCCGCAT TTTCCGCTCC GGCGTTGAGC GAGAACGAGT CGGCCGACAG CGAGATCCTG
TGGAGTGATG CGTTCCTCAC CCTCGGGATT TCGGACCTCA AAGGGATAAA GGACATCCAC
AAAGCCGCCT GCGAAGACAG CCCCCTCACC CCGGAACCGG GGCTGCGCAC CAAAGACCTC
CTACAAGCCG GATTCACGTT CCGCACCCCG CTCTCACCGG GACAGTCTCG ATTTCGGTTC
GTTCTCGATG CCGGCCTCAA CGGCAGCGAG GAACTCCGCT TCGTTCCGCT CGGCAAGACC
ACGCAAGTCC GCGCGCAATC CTCCTGGGCG GATCCAAGCT TCGTGGGGGA CTTCCTGCCC
GAAGAACGGA ATATCACCGA CAGTTCCTTC AAAGCGTCCT GGAAAGTGCT CCATCTGAAC
AGGAACCTGT CGCAATCCTG GATCGGCCCG CAGCCGAACC TGGAAAGCTC GTCGTTCGGC
GTGAAGCTCC TGCTCCAGGT GGACGAATAC CAGAAGAACT GGCGGGCCGT GCGGTACGCC
ATCATGTTTG TCGCGCTCAC CTTTCTGGCC TTCGGCATGA TCGACGTCCT CAACCGGAGC
CCTTTTCACC CCGTCCACTA CACCCTGGTC GGGCTGGCAC TGGTCCTGTT CTTCGTCCTG
TTGCTCTCAG TGTCCGAATA CCGGTCCTTC AACACGTCAT ACCTGGTTGC ATCCCTGCCG
AACATCTTTC TGATCGGTGC CTACACTCGC GGCGTTACCC GCAGATGGGG GGTGACCGCA
GTGATTGCCG GCGTTCTGGT CGCACTGTAC GGATTTCTTT TCGTGCTGCT GCAACTGGAG
GATTACGCCC TGCTTCTCGG CAGCATGGGT CTCTTCGTCA GTCTCTCGCT GGTGATGTTC
CTGACGCGCA GGATCGACTG GTTCGGGATG GGATCAGGGA AGGCGCGCGA AGAGGACGGC
CCCGGGCTGC CGGAGTTGCC TCTGGGATGA
 
Protein sequence
MNPFSLRSSI VSRMLIVAVL GTVLVIPISL VTDLIQDRRH TRAEAVSEVT EKWGRQQTVT 
GPILTIPVKR KHKLSDGTIK PYIVHAHFLP DSLDCNAELS PSIRYRGIYR VVLYTAGLHL
EAAFSAPALS ENESADSEIL WSDAFLTLGI SDLKGIKDIH KAACEDSPLT PEPGLRTKDL
LQAGFTFRTP LSPGQSRFRF VLDAGLNGSE ELRFVPLGKT TQVRAQSSWA DPSFVGDFLP
EERNITDSSF KASWKVLHLN RNLSQSWIGP QPNLESSSFG VKLLLQVDEY QKNWRAVRYA
IMFVALTFLA FGMIDVLNRS PFHPVHYTLV GLALVLFFVL LLSVSEYRSF NTSYLVASLP
NIFLIGAYTR GVTRRWGVTA VIAGVLVALY GFLFVLLQLE DYALLLGSMG LFVSLSLVMF
LTRRIDWFGM GSGKAREEDG PGLPELPLG