| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2642 |
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| Symbol | prfC |
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| ID | 4459046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3267545 |
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| End bp | 3269131 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639703413 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_846755 |
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| Protein GI | 116750068 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.495995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCACC GGCACAGACA GGAAATCGAC CGGCGGCGGA CTTTCGGCAT CATCAGCCAC
CCCGATGCCG GAAAGACGAC CCTTACGGAA AAACTGCTCC TGTTCGGAGG AGCCATCCAA
CTGGCGGGGG CGGTCAAAGC GCGCAAGGCC TCCAGGCATG CCACCAGCGA CTGGATGGCC
ATCGAACGCG AGCGCGGCAT ATCCGTGACG ACTTCCGTAA TGAAGTTCAA TTACCGGGAC
TTCGAGATCA ATTTGCTCGA CACCCCCGGC CACCAGGATT TTTCGGAAGA CACCTACCGG
GTGCTCACCG CCGTGGACAG CGCCCTCATG GTCATCGACA GCGCCAAGGG CGTGGAGCCT
CAGACCGAAA AACTGATGGA AGTCTGCCGC ATGCGCAACA CTCCCATCAT CACCTTCATC
AACAAGCTCG ACAGGGAAGG ACAATCGCCG CTCGCCCTGC TCGGAGAAAT CGAGGACAAG
CTCCAGATCG AATGCACTCC CCTGTCCTGG CCGATCGGTT CCGGGAAGAG CTTCAAAGGA
GTCTACGATC TTCTCGGAAA GAAGCTCCAT CTTTTCGCCC CCGGGCAGGA AACCCGCACC
AATGGGGGCA TGGTCTTCGA CGACCTCTCC GATGCGGCGC TGGACGAGCT CCTCGGCCGC
CAGGCCGTCC AGTTGAGGGA AGATGTGGAG CTGCTCGAAG GAGCGGCGAA CCCCCTGGAA
CAGGAGCATT ACCTGCGGGG CAACCAGACT CCGGTTTTCT TCGGCAGCGC GCTCAACAAT
TTCGGCGTTC GCGAGTTGCT GGACGCTTTC GTGCAGATGG CTCCCCCGCC TCACGCCCGC
CCGACGGTCT CCCGGGAAGT GTCCCCCTAT GAAGACCAGT TTTCGGGATT CGTGTTCAAG
ATTCAAGCCA ACATGGACCC CGCCCACCGG GACCGGATCG CCTTCCTGCG CATCTGCTCG
GGAAAGTACA CGCGCGGGAT GAAGGTGATC CACCATCGCG CCGGCAGGGA GATGAACATC
GCCAACGCCA CCATCTTTCT CGCCCAGGAC CGCACCAATA TCGATGAGGC GTACCCCGGT
GACATCATCG GCATCCACAA TCACGGCACC ATCAAGATCG GCGATACCTT CACCGAAAAA
GAGCCGCTGC GGTTCACGGG CATACCCAGC TTCGCGCCGG AACATTTCCG GCGGGTCATT
CTGAAGAACC CCCTCAAGGT CAAGCAACTG CGGAAAGGAC TCGCTCAGTT GACGGAGGAA
GGTGCGGTCC AGGTGTTCCG GCCTCTTGCG GCCAGGGACT ACATCCTGGG CGCCGTCGGC
GTTCTGCAGT TCGATGTCAC GGTCGCCCGC CTGAGAACCG AGTACGGCGT CGATGCGGAC
TATGAGCCGG CGGGATACGC GGCGGCGCGC TGGGTCGAAT CTGACTCCAG AAACGTCATG
GAGGAATTTG AAAAGGAGAA CCGGGGCAGC CTGGCCTTGG ATGGGGAGGA CCGTCTGACC
TACCTCGCGC CGAACGAATG GCGGCTCGGA TTCGTCATGG AAGACTGGCC CCGAATCAGA
TTCCGGAAAA GCATGGAATG CAATTGA
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| Protein sequence | MNHRHRQEID RRRTFGIISH PDAGKTTLTE KLLLFGGAIQ LAGAVKARKA SRHATSDWMA
IERERGISVT TSVMKFNYRD FEINLLDTPG HQDFSEDTYR VLTAVDSALM VIDSAKGVEP
QTEKLMEVCR MRNTPIITFI NKLDREGQSP LALLGEIEDK LQIECTPLSW PIGSGKSFKG
VYDLLGKKLH LFAPGQETRT NGGMVFDDLS DAALDELLGR QAVQLREDVE LLEGAANPLE
QEHYLRGNQT PVFFGSALNN FGVRELLDAF VQMAPPPHAR PTVSREVSPY EDQFSGFVFK
IQANMDPAHR DRIAFLRICS GKYTRGMKVI HHRAGREMNI ANATIFLAQD RTNIDEAYPG
DIIGIHNHGT IKIGDTFTEK EPLRFTGIPS FAPEHFRRVI LKNPLKVKQL RKGLAQLTEE
GAVQVFRPLA ARDYILGAVG VLQFDVTVAR LRTEYGVDAD YEPAGYAAAR WVESDSRNVM
EEFEKENRGS LALDGEDRLT YLAPNEWRLG FVMEDWPRIR FRKSMECN
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