Gene Sfum_2541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2541 
Symbol 
ID4459157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3136781 
End bp3138325 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content60% 
IMG OID639703307 
ProductFHA domain-containing protein 
Protein accessionYP_846654 
Protein GI116749967 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.913197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCA GCTTTTTTCT CCAGGAAGAG GGTTCAAGAG TCATCCACCG GGTGAGCCTG 
CCGTGCGTGA TGGGTCGCGA AGAAGGGGTG GACCTTCGGT TTGCCGACCC GACGGTTTCG
CACCGCCATG CCCTCATCTC GGAGGAAAAC GACCATATCT GGATCGATGA CCTGGGGAGT
CTCAACGGCA TCTACGTGAA CGATGTGAGG ATCGAGGACA AGGCGCCGCT CAAACCCGGA
GACACCATCC GGCTGGGACG CTTGACTTTC TCGGTGTGCA GGTCCTACGA GGAAGTGGCC
GGAGACACCA TCGCCTTCCC GAGCCTGCAC ACGATGGGCG ACCGCAGGCT CGATCGCCAG
CGACTCAAGT GGATCTACGA AATCACCGTC GAACTGTCGG AGAAACAGGA CCCCGCTTTG
CTCGGAGAGA GGTTCTTTTC CCGGCTGAAG GATATTTATC AGCAGGACCA GGGCTATCTC
GGGGTTTTCA AGGAGGACGG CTCGCTGGAA TCCGTCTTTT CCGACGCTTC CCTCGACAGC
GTGCCCGTCA GCCGGAGCAT CGTCGACCGG TTGCTGCAGA ACGGGGAGTC GTTCATCCTG
GAGGATGCGC TGGGCGGGGA GGCTCTAAAC AAGGATGCGG CAGCGCTGGA AATGAAGATC
AGGTCGGCGT TGTGCGTACC CCTGCTTTAT CACAACCAGA TTCACGGGCT GATCTATCTC
TCGCGGAGCG TTCCCGGCGC GTACAGCCAC GAAGACCTGG AATTCCTGAG AACCGTCTCG
TGCGTCCTCG CCCCGATGGT TGAAAACGCG CGCCTCTGGG CCGAGATCAA GGGCCTGTAT
GCCTCCACCG TGGATAGCCT CAAGGAGACC CAGTCGCGGT TGATCGAGGT GGAGCGGGCG
GCCGCCTATG CACGGCTGGC CCAGGCCATG GCGCACGAAA TAAGAAACCC TCTCATGGTG
ATCGGCGGGA TGGTGAGGAG GATGCGGCGG CCGGCCCCGG ATGAGCCGGA AGGAGCCGGG
ATGCAGGCCG TCATGAGCTC CGTGGAAAGA ATCGAGACCG TCCTCAGGGA GGTGGACGGC
TTCGTCAAGC TTCCTCCTCC AACCAAGCAG TTGAGAAAGA TCGATTCCCT CATCCTCGAG
GAAATCCGGC AGCACGATCG GGACTGGAAG GAAAAGGACA TCCGCCCTCA ACTGGTGGTG
GGCACTTCCC ACCTGATGAT TCCCATCGAC GATACCCTCT TCCGGAAGGC ATTGTCCCTG
ATCTTCAGGG AATCCCTGTC CAACGTTCCC CGCGGATCGG AATTGAGCAT ATCGATCCGG
GACCGCGGCG GCGAGCTCGA AATCGAAATC GGCCGTCGGG CCGACAGGAC GGTCTACTGC
GAGGCTTTCG ATCCTGCCCT TCAGCACAAG CCATGGGTCC TCGACCTGTT CCTGAACATG
GGCCACAAGA TCATCGCCGA CCAGGACGGG AAGCTTCTCC TGGATCGACA TTCCAGCTCC
GTGTTCCCGA TGGTCATCCG CTTGCCGAGG ATCGTGAAAC CATAG
 
Protein sequence
MITSFFLQEE GSRVIHRVSL PCVMGREEGV DLRFADPTVS HRHALISEEN DHIWIDDLGS 
LNGIYVNDVR IEDKAPLKPG DTIRLGRLTF SVCRSYEEVA GDTIAFPSLH TMGDRRLDRQ
RLKWIYEITV ELSEKQDPAL LGERFFSRLK DIYQQDQGYL GVFKEDGSLE SVFSDASLDS
VPVSRSIVDR LLQNGESFIL EDALGGEALN KDAAALEMKI RSALCVPLLY HNQIHGLIYL
SRSVPGAYSH EDLEFLRTVS CVLAPMVENA RLWAEIKGLY ASTVDSLKET QSRLIEVERA
AAYARLAQAM AHEIRNPLMV IGGMVRRMRR PAPDEPEGAG MQAVMSSVER IETVLREVDG
FVKLPPPTKQ LRKIDSLILE EIRQHDRDWK EKDIRPQLVV GTSHLMIPID DTLFRKALSL
IFRESLSNVP RGSELSISIR DRGGELEIEI GRRADRTVYC EAFDPALQHK PWVLDLFLNM
GHKIIADQDG KLLLDRHSSS VFPMVIRLPR IVKP