Gene Sfum_2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2470 
Symbol 
ID4459220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3050159 
End bp3050608 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content61% 
IMG OID639703236 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_846585 
Protein GI116749898 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGCGG TGGTGCAGCG AGTGGCGGAA GCGAGCGTGA CGGTCAACGG CGAGGAGACC 
GGCAGGATCG GCAAAGGCGT GCTCGTGTTT CTGGGAGTTG GCCCGGACGA CGGCTCGGGA
GACATTCGTT ACCTGTCAGA GAAAATCGTG AATCTCAGGA TTTTCCCCGA TGCATCCGAC
AAGATGAATC TCTCGGTCCG CGAGGTTGGA GGCGGTGTGC TCGTCATCTC GCAGTTCACC
CTGTTCGGCG ACTGCCGCAA GGGCCGCCGG CCCTCATATG CGGGGGCCGC ACCTCCCGAA
CTGGCCAGGA GACTCTACGG GGAATTCGTC GAAGAGTTGA AAAAACAAGC CGTTCCCGTT
GCCACGGGGA TGTTCCAGGA AATGATGCGG GTGCACCTGG TCAACGATGG GCCGGTGACG
CTGCTGCTGG ACAGCAGGAA AGTGTTCTGA
 
Protein sequence
MRAVVQRVAE ASVTVNGEET GRIGKGVLVF LGVGPDDGSG DIRYLSEKIV NLRIFPDASD 
KMNLSVREVG GGVLVISQFT LFGDCRKGRR PSYAGAAPPE LARRLYGEFV EELKKQAVPV
ATGMFQEMMR VHLVNDGPVT LLLDSRKVF