Gene Sfum_2456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2456 
Symbol 
ID4459241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3033982 
End bp3035394 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content63% 
IMG OID639703222 
Productradical SAM domain-containing protein 
Protein accessionYP_846571 
Protein GI116749884 
COG category[R] General function prediction only 
COG ID[COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.677183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCG CACGAGAACA CAGTCCTTCG ACTCTGTACG CGAACACCGG TTACGGGCCC 
GGTCTGGCCG TCCTGGATTT CGGCGACCCG AACCGGGTGG CTGTCGTCGA ACCGGACCTG
GCCTGGTGGG CGCTGGTCGA ACGCCATGCC CTCGGCAACG CCCTTGCCGG GGAGCTCGTC
GGCGACCTCC GCGCCCGGGC CGATTCCTTC CGGGAGGAAA TGGGGCATCT TCGCTTCGGC
CTGAAGCCTT CGGCCGTTTA CTTCAACCCG ACGGACCGGT GCAACTTCAA CTGCAGCTAT
TGCTACCTGC CGGAGGAGTT GCGTCGCAAC GGGAAGACCA TGACGCCGGA GGAGGTCTGC
TCGGCCCTGG AACGCCTCAA GTCCTGGTTT TGCGGGATCA TGCCTGCGGG CGCGCGGCCC
CAGCTGATCT TCCACGGAAG CGAACCGCTG ATGGCGAAGG AAGCGATTTT CGCCGGAATG
GAAAGGTTCC GCGATGACTT CACCTTCGGC ATCCAGAGCA ACGGGATGCT GCTGGACGAC
GAGGCCATAG CCTTCCTGAA GGATCACGGC GTCGGCATCG GGGTTTCGCT CGACGCTCCG
ACCGCGGACG TGGCGAACCT CACGCGCAGG AACTGGAGCG GAACGGGCGG GTTCGAGCGG
GTCTCGGAGG TGATCGAGAA GCTGGCATCT TATCCGGCCT TCAATGTGAT CACAACGGTG
ACGCGCGGCA ACGTCCACAC TTTGCCCGCC ATGGTGGATT TCTACCACCA ACGGGGCATC
GCCACGGTGA TGTTCAACCC GGTCCGCTGC ACGCAGCAGG GCGGCAGGGA CCTCAAACCG
TCCGACCGGG TGCTGGCGGA GCGTTTCTGC CGTGCGCTGG ACCGTGCGCA CGAATTGTAC
GTCGAGACCG GGCGAAAACT GGTTGTCGCC AATTTTGCCA ACGTGCTGGC AGGCATCATC
GGCCCGACGG GACGGCGGCT CATGTGCGAC ATTTCGCCCT GTGGAGGCGG TCGGTGCTTT
TTCGCCGTAT CGGCGCAGGG CGACGTGTTC CCGTGCAGTG AGTTCATTGG TTTTCAAGAG
TTCAAGGGCG GCAATCTCTT CCGGGATGAT CTGTCCGGCA TTCTCGAGAG CGCTCCCTTT
CGGGCCGTTA CCGGGAGGAA GGTGGAGGAA ATCGTGCCGT GCGCCGGGTG CGCGATCAGG
CATTTCTGCG GCGCGCCCTG CCCGGCGGAA GTCAAGGCGG TTTCCGGCAC GCTGAACGCT
CCGAGTCCCT ATTGCGCGTT TTACGAGGAA CAGGTGCGTT ACGCCTTCCG CGTGATCGCG
GCACAACGCG AGGACGCCTA CCTTTGGGGC GGCTGGAGGG ACGAGACGGA AGAGACGTTC
AACTGTATGG TGTCCAAACA AGCGCCGGCC TGA
 
Protein sequence
MNTAREHSPS TLYANTGYGP GLAVLDFGDP NRVAVVEPDL AWWALVERHA LGNALAGELV 
GDLRARADSF REEMGHLRFG LKPSAVYFNP TDRCNFNCSY CYLPEELRRN GKTMTPEEVC
SALERLKSWF CGIMPAGARP QLIFHGSEPL MAKEAIFAGM ERFRDDFTFG IQSNGMLLDD
EAIAFLKDHG VGIGVSLDAP TADVANLTRR NWSGTGGFER VSEVIEKLAS YPAFNVITTV
TRGNVHTLPA MVDFYHQRGI ATVMFNPVRC TQQGGRDLKP SDRVLAERFC RALDRAHELY
VETGRKLVVA NFANVLAGII GPTGRRLMCD ISPCGGGRCF FAVSAQGDVF PCSEFIGFQE
FKGGNLFRDD LSGILESAPF RAVTGRKVEE IVPCAGCAIR HFCGAPCPAE VKAVSGTLNA
PSPYCAFYEE QVRYAFRVIA AQREDAYLWG GWRDETEETF NCMVSKQAPA