Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2437 |
Symbol | |
ID | 4459257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3012007 |
End bp | 3015282 |
Gene Length | 3276 bp |
Protein Length | 1091 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639703203 |
Product | CzcA family heavy metal efflux protein |
Protein accession | YP_846552 |
Protein GI | 116749865 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.463281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACA GGATCATCGA ATATTGCGCG AACAACAAGT TCATCGTCTT TGTTTTCATC GGCATGGCCA TCGCCTCCGG CTACTATGCG ATGATAAACG TTACCCTCGA CGCCGTTCCC GACCGCTCGG ACACGCAGGT GATCATCTAC TCCCGCTGGG ACCGCAGCCC CGACATCATG GAAGACCAGG TCACCTACCC CATCACGACC GCCATGCTCG GCGTGCCCAA GGTGCGCGAC ATCCGGGGTT TCTCGGACTT CGGCTACTCC TTTGTCCAGG TGATTTTCGA AGACGGGACC GACATCTACT GGGCACGCTC CAGGACGCTG GAATACCTGA GCAACATCCT CCCGCGCCTT CCCCAGGGCG TCCAGGTGGA AATGGCCAAG GATGAGACCG CCAACGGCTG GGTGTTCCAG TACGCCCTGG TGGACACCAC CGGCAGGCAT AACCTCGCGG AACTGCGCTC GATCCAGGAC TGGCAGCTGC GATACGAGAT CCAGTCGGTC CCCGGGGTCG CGGAAGTGGC CCCCATCGGC GGGTTCGTCC GCCAGTACCA GGTCAATCTC GACCCCAATG CCCTTTTTGC CTACAAGGTT TCGGTGGAAA AGGTCGTGGA AGCCATCCGC GCCGGCAACA ACGACGTCGG GGGACGCCTC CTGGAATTCT CCGGCCGCGA ATACATGGTG AGAGGCCGGG GTTACATCAA GTCCACAGCC GATATCGAAA ACATCGTGGT CGGCACCAAT GCGCAGACCG GGACGCCCAT CCTGTTGAAA CAACTGGGCC AAGTGGCGCT GGGACCGGAT ATCCGGCGCG GAGTGGCCGA ACTGGACGGG GAAGGGGAAA CCGTCGGCGC CATCGTCATC ATGCGTTACG GGGAAAATGC CCTGAAGGTC ATCGAGCGGG TCAAAAACAG GCTTGAAGAA ATCAGGCCCA CCTTGCCCGA AGGGGTAAAA CTGGTCACCA CTTACGACCG TTCCGACTTG ATCGACCGGT CCATCGAAAC GCTGACGCAT ACGCTCATCG AGGAACTGGT CATTGTGAGC CTGGTCATTC TCATCTTTCT CTGGCACATT CCCAGCGCCA TCATCCCGAT CCTCACCATC CCCATCACGG TGATCATCTC CTTTATCCCC ATGTACGGCA TGAACCTCAC CGCCAACATC ATGTCGCTGG GCGGTATCGC CATCGCCATC GGGGCCATGG TTGACGCGGC GATCGTGGTG GTGGAGCAGA CGCACAAGAA GCTCGAACAT TGGGAAGCGG AGGGAAGAAG GGAGAACTTC AAGGATGTCG TGGTGGGGGC CGTCAAGGAG GTGGGAGGAC CGAGCTTTTT CGCCCTGCTG GTGATCGCGG TTGCGTTCCT GCCCATCTTC ACCCTGGAAG ACGTGGAAGG CCGCCTGTTC AAGCCCCTCG CCTACACCAA GAATTTTGCC ATGGCCATCG CGGCGGTGCT CGCCATCACG CTCGATCCGG CACTCCGTCT GCTCTTCACG CGCATGACGC ATTACGAGTT CCGCCCCCGC TGGCTTGCCT GGATTGCCAA CACCGCGCTC GTCGGCAGGA TCCACAGCGA GGAGAATCAC CCCATCAGCC GGCCCCTGAT GAGGATCTAC CACCCCGTTG TCGAGTTCGT CCTGCGGCAC CAATATGCGA CGATTCTTGC GGCGGTGCTC GTGGTTGCGG CCACCGTCCC GATCTTCAAC CGGCTTGGTT CCGAATTCAT GCCGCCCCTC GATGAAGGCG CCCTGTTCTA CATGCCCACG ACGGTCCCCG GAATTTCGGT AACCGAAGCC ACCAACCTGC TCCAGATGCA GGACAAGGTG ATCAAGTCCT TTCCGGAGGT CGAGCGGGTG TTCGGAAAGG CGGGTCGTGC CGAAACCGCC ACCGATCCGG CTCCATTCAG CATGATGGAG ACCGTTATTC TCCTCAAGCC GCCCTCGGAA TGGCCCAAAG TGCCGCGCTG GTATTCGGAT TTCGCCCCCG AGTGGCTTCA GAGCATTCTC AGGCGTGCCT GGCCCGACCA CAGAAGCACC AACGACCTGG TCTACGGTCC GGGCGGGCTC AATGAAGCCA TGCAGATACC CGGGGTCGTC AACGCATGGA CCATGCCCAT CAAGGCGCGC GCGGACATGC TGTCGACCGG GATTCGCACG GCCGTAGGCA TCAAGATACT CGGCAAGGAT CTGAAAACCA TCGAGGCCAT CGGGCAGAAC ATGGAAGCAG TCATCAAGGA CGTTCCCGGC ACGGTGACGG TGTTCGCCGA ACGCACCGCT GCGGGATACT TCATCGATTT CGACCTCAAA CGCGAGGAGC TCGCCCGCTA CGGCCTGACG GTCGCACAGG TGGAAACGGT CATCGGCTCC GCGGTGGGAG GCGAAAACGT CACAACCACC ATTGAGGGGC GCGAACGCTA CCCGGTCAAC GTGCGCTACA TGCGGGACTA CCGGAGCTCG TTTGACGGGC TGAAGCGCAC CTTCGTCACC ACCATGGACG GGACCCAGAT ACCCCTCGCC CAGGTTGCCG ACATCAAGAT CGTGTCCGGG CCGGGCATGA TCCGGGACGA CAACGGGCGG CTGAGCGGTT ACGTATACGT GGACATCAAG GACCGCGACC TCGGCGGATA CGTCCAGGAC GCCAAGCGCG CCGTGCTGGA AAAGGTGAAA CTGCCTCCCG GCTACAGCCT GGTCTGGAGC GGCCAGTACG AGTATTTGCA GCGCGTCGAG CAAAGGCTCC TTGTCGTGGT GCCGATTACG CTTTTCATCA TCTTCCTGCT GATCCACTTC AACACGGGAG CCGTGTCCAA GACCCTCATC ATCCTGCTGG CAGTGCCGTT CTCCGCGGTC GGGGCATTCT GGTTTCTGTA CTTGCTCGAC TACAACCTCA GCATCGCCGT ATGGGTCGGG GTGATCGCAC TCATGGGGGT GGATGCCGAA ACCGGCGTCT TCATGCTCCT CTACCTGGAC CTCGCCTTCT ACGCGCGCCG GAAACAAGGG CGGATGCAGA GCAAGGACGA CCTGCGGGAA GCCATCCTGG AAGGGGCCGT GAAACGGTTG CGGCCCAAAT TCATGACCGT GGCGGTGATG TTTCTCGGGC TGGTTCCCAT CATGTGGTCG ACGGGCGCCG GATCGGACGT CATGAAACGC ATCGCCGCGC CGATGATCGG CGGCATTTTC ACGTCGTTCA TCATGGAACT GGTGGTCTAC CCGGCAATCT ACGAAGTCTG GCGCTGGCAC TTCCATGTGA AAAAGGGAAC CGGCCCTGCA AACTGA
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Protein sequence | MIDRIIEYCA NNKFIVFVFI GMAIASGYYA MINVTLDAVP DRSDTQVIIY SRWDRSPDIM EDQVTYPITT AMLGVPKVRD IRGFSDFGYS FVQVIFEDGT DIYWARSRTL EYLSNILPRL PQGVQVEMAK DETANGWVFQ YALVDTTGRH NLAELRSIQD WQLRYEIQSV PGVAEVAPIG GFVRQYQVNL DPNALFAYKV SVEKVVEAIR AGNNDVGGRL LEFSGREYMV RGRGYIKSTA DIENIVVGTN AQTGTPILLK QLGQVALGPD IRRGVAELDG EGETVGAIVI MRYGENALKV IERVKNRLEE IRPTLPEGVK LVTTYDRSDL IDRSIETLTH TLIEELVIVS LVILIFLWHI PSAIIPILTI PITVIISFIP MYGMNLTANI MSLGGIAIAI GAMVDAAIVV VEQTHKKLEH WEAEGRRENF KDVVVGAVKE VGGPSFFALL VIAVAFLPIF TLEDVEGRLF KPLAYTKNFA MAIAAVLAIT LDPALRLLFT RMTHYEFRPR WLAWIANTAL VGRIHSEENH PISRPLMRIY HPVVEFVLRH QYATILAAVL VVAATVPIFN RLGSEFMPPL DEGALFYMPT TVPGISVTEA TNLLQMQDKV IKSFPEVERV FGKAGRAETA TDPAPFSMME TVILLKPPSE WPKVPRWYSD FAPEWLQSIL RRAWPDHRST NDLVYGPGGL NEAMQIPGVV NAWTMPIKAR ADMLSTGIRT AVGIKILGKD LKTIEAIGQN MEAVIKDVPG TVTVFAERTA AGYFIDFDLK REELARYGLT VAQVETVIGS AVGGENVTTT IEGRERYPVN VRYMRDYRSS FDGLKRTFVT TMDGTQIPLA QVADIKIVSG PGMIRDDNGR LSGYVYVDIK DRDLGGYVQD AKRAVLEKVK LPPGYSLVWS GQYEYLQRVE QRLLVVVPIT LFIIFLLIHF NTGAVSKTLI ILLAVPFSAV GAFWFLYLLD YNLSIAVWVG VIALMGVDAE TGVFMLLYLD LAFYARRKQG RMQSKDDLRE AILEGAVKRL RPKFMTVAVM FLGLVPIMWS TGAGSDVMKR IAAPMIGGIF TSFIMELVVY PAIYEVWRWH FHVKKGTGPA N
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