Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2371 |
Symbol | |
ID | 4459322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2920254 |
End bp | 2924057 |
Gene Length | 3804 bp |
Protein Length | 1267 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639703136 |
Product | hypothetical protein |
Protein accession | YP_846487 |
Protein GI | 116749800 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.217084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCGGC TTCGGTCATC CATGGTTGGA GCGGCCCTGC TGCTCGTTGT GCTGCTTCTG TTGCCGGTCG ACTGCCGCGC TCAGCTCTGC TCCGACTTTC CCGACGGGGG AACCCTGACG GGCGTCGTGA ATACCTATTA CCAGGGCTAT CAGTCCGCTT CCGCCGGCGC CACGCAAATC CGGGTGGATG TTTCGACCAT CCGCGGGGCG GGAGCCTCCA TCGCCTCGGG CACCATGCTG CTCGTGATCC AGATGCAGGA CGCCACCATC AATTCGTCCA ACAACAACCG CTACGGCGAC GGCGGGACAG GCGCTATCGC CAACGGACAA ACCGACCTCC GCTCATCCGG CTATTTCGAA TACGTCCTGG CGCAGGGCGC GCCCGACGCC AACGGCTACG TCAACATCAC CGGGGCGGGG ACGGGCAACG GGCTGCTCCA CGCGTACTAC CTGGCCGCGG GCCCTCCCCA AAGGCGATTC CAGGTGATCG TCGTCCCGCG ATACAAGACG GCGACCTTGA GCGGCTCGCT CACGGTTTCC CCCTGGAACG GCAACAACGG GGGCGTGCTG GCGCTGGACA TCACCGGAAC GCTCACGCTG GGCGGGACGG TCAGCCTCGA CGGGATGGGA TTCCGGGGGG GCGGCGGGCG TGCATTGACG GGCGACAGCA GCGGCAGAAA TACCGACTAT CGCAGAGTCG TTACCGATAC GTGCCATGGT TCCAAGGGCG AGGGCATCGC CGGAACCCCG CAGTACGTCT TCGACGGTTC CGCCGTCACA AACACCACCG TTGACGGGTA CCCAAACGGA AGCCAGGCCA GGGGCGGTCC CGGCAACGCG GCGGGAGGAG GAACGGACGG CAACCCGTCG ACCAACGATG AAAACAGCGG GGGCGGCGGC GGCGGAAACG GCGGCCAGGG AGGTTACGGA GGAAATTCCT GGGACAGCAA CCTGGCTGTC GGCGGGCATC CCGGCGCCGT GTTTCCGTAC GCGGTGGGGA CGAACGCTCG AATCGCCATG GGCGGCGGCG GTGGAGCGGG ATCCCGCAAC AACTCGTCTG GATTCCAGAG CTCCGGCGGC CCCGGAGGCG GCATCGTCAT CATCCGCGCC ACCGCCGTGA GCGGAACGGG CACGATCACG GCAAACGGCA GAGGCCGCGA CATCGCCAAC ATCACCCCGG AGAACGACGG GGGAGGAGGA GGAGGCGCCG GCGGAAGCAT CGTCGTCGTG ACGCGCGACG GGAACCTTTC CGGGCTCACC GTGGAAGCCA GGGGAGGAGG AGGCGCGGAC GCCTGGCCGA CCGAGGCTCC CGGAGGCACT CCCGGAGCCC GCCACGGACC GGGAGGCGGA GGCGGAGGCG GGGTCATCCT CCTGTCCGGC GCGCCCGCAT CTTCCAGTGT CTCCGGCGGC GTCAACGGCA CCACCACCAC CGCCGCGGAC GCTTTCGGCG CGACCGCGGG CAGCGCGGGC ACGGTTCAGA CCGCCGTCAC GATCAATCAG GTCCCCGGAA TACAGTCGTG TAACAGCAGC GCGAGCCGCG CGACCATTCG CGGCATCCGC GTCGACCGGT CCGGCCTGGT CGAATTCGCC ACCGAATCCC AGCAGGGCTC CATCGCCTTC CACGTCTGGG AAACCTCCGA TCCGTCGGGC AGGGAAGACC GGCGGCTGCT GAGCTGGGAG GCTACCCCGT CGCTGCCCCT GACCACGTTG GAGCCGGTGA TTTACCGGGT CCCGACCCGG CCGGTCGCCG CGCCGTACAT CCTGATCGAA GAGATCGACA CGCGGGGCGC CCACCGCATG ATGGGTCCCT TTCCGGTATG CGATGAAACC CTGGCCGAGG AATTTCTGAA CACCGAAGTG CGCGTGGCCG GGAACGCGGC GCTGAAGGCG GCCGCAAAAC AAACGGCAAG GCGCGGCGGG CACCGGGAAT CGCCTTCGCG CACGGCGGCG ATTCCCTCGA GTGTGCCCGG TTCGTCGGAC GCCGCTCCCG TGGCCGTCAA GATCGAGGTC TCCTCGCCCG GGATTGTGCG CGTGCCCGTG GCGGACCTCG TCTCCCTGGG GATGCCCCCC GCCTTGGCGA GCCACCCGGA GCTCCTGCGC CTCACGAGCC TCGGGGTTGC CGTCCCGTTC AGCATCGTTC CCGGAACGAA CGGGGGAGAC GCGCTGCAGT TCAGCGCCGA TACGCTCTCA AGCGACTACA CCGACCGCAA CGCGGTCCTG CTCTCCTGGG CATGGAACCC GTTCGCCACG CCCAAAGTCG GGCTGACCCG TTCGGGTTTT GCGCTCGAAC CCGGCATGGT GCGCATCGAG CGCGACCGGT TCTACGCTCC CTTCGCGGCG CCCGGCGCCG ATCCCTGGGT TTGGGATTTC GTTGCGGCCC CGACGGCATC CCGCACCTGG TCCTTCGATC TTCCCCGTCC CGTTTCCGCG GGAACGGATC CGGTATCGGT GCGGATCGGC TTTTCCGGGT TCACCACTCA TAACCATACC GTGCGCGCCG CGCTTAACGG CCTGCCGGTG GGCGAAACCA CCATCGCCGG GCGGACCCCG GGGATGATCC TGGGGCAAGT CCCGGCGGGC ACCGTGCTCG GGAGCGGCAA CCAACTGAGC GTCCAGTACA CGGCAACCTC GGACAACCCC GATGAGGCGG GCCTCGTCTT TCTCGATGTC GTGGACGTCG GCGTCCCGCT CCAGCCGGTC ACCGCCGAGG TGTCCGCGGA CCGGATCACT CCCTTCGCCT GCGCCCTGCC GCCGTTGAAC GGCGTGGACT ACTGCATCGT CACGCACGGC CTGTTCACCG ACGGGGCCCG GCGCATCGCC GAACAGAAGC GCAATGAAGG GTACAACCCG GCGATCGTGG ACGTGGAAGT GCTCTACAAC CGTTACAGCG CGGGCGTGCC GGAGCCCAAC GCGCTGCGCA GATTTCTGCG CTGCGCGAGA GTCCATTCCG GCGGGGCGCT GCGCTACGTG CTCCTGGTCG GCGACGACAC CTTCGACCCG AAAGACCACC TGGGCAGGGG GCTGGTTTCA TTCATTCCGT CCCTCAACGG AATGGACGAG ATTTTCGGCA GAGTCCCCTC GGAAAACCGG TACGCGGATC TTAACGACGA CGGTGTTCCG GACCTTGCCA TCGGGCGGCT TCCCGTCTCC ACGGTGGAGC AGATGGAGTC GATGGCCGAC AAGATCGTCG GGCAGGACGC GCTCCTGGCA GCGGGCAAAG GGAAGCACCT TTTCGCCGTG GACAATCCGG GAGACGACGA CCCGGACTTC AGGCAGTGGG CGGAACAGGT CGCCGGGACC CTGCCTCCGG AGACCGCAAT CAAGTGGGCC GATATCGCCG AAGGCCCGGC GGCGGCACGG GCTGTTCTTC TGCAGAGCCT GCGAACCGGG GCCGAGGCCA CGCATTATTT CGGCCACGGA GGTTTTGAAA TCTGGAGCGA CGACGGGTTG CTGACGGCAA CCGACGCGGC CGCACAGGCG GGCAGCGGCG TCGGAACGGT CCTTTTCACC TGGGCCTGCC AGAGCCAGTG GTATCAGTAT CACCTGGGCC TGACCGTCAA CGAAGCCCTG CTCCTGGCCC CCGACGGCGG GGCGGTGGCG GCGCTGGGCC CCGCGGGAAT AACCCCGCCC GAGCTGCAGC GGATGCTGTC CACCAACGTT TATGCCGGCT TGAAGAGGGG ACTGACCCTC GGCCAGGCGA TCCGGCAGGC CAAGGCCAGG GCGATCCGGG CGGGCGGTTT CACGCGCCCC GTTGTGGACG GCTGGAACCT GCTGGGAGAC CCCGCTCTGC GTTTGAACCG GTAG
|
Protein sequence | MDRLRSSMVG AALLLVVLLL LPVDCRAQLC SDFPDGGTLT GVVNTYYQGY QSASAGATQI RVDVSTIRGA GASIASGTML LVIQMQDATI NSSNNNRYGD GGTGAIANGQ TDLRSSGYFE YVLAQGAPDA NGYVNITGAG TGNGLLHAYY LAAGPPQRRF QVIVVPRYKT ATLSGSLTVS PWNGNNGGVL ALDITGTLTL GGTVSLDGMG FRGGGGRALT GDSSGRNTDY RRVVTDTCHG SKGEGIAGTP QYVFDGSAVT NTTVDGYPNG SQARGGPGNA AGGGTDGNPS TNDENSGGGG GGNGGQGGYG GNSWDSNLAV GGHPGAVFPY AVGTNARIAM GGGGGAGSRN NSSGFQSSGG PGGGIVIIRA TAVSGTGTIT ANGRGRDIAN ITPENDGGGG GGAGGSIVVV TRDGNLSGLT VEARGGGGAD AWPTEAPGGT PGARHGPGGG GGGGVILLSG APASSSVSGG VNGTTTTAAD AFGATAGSAG TVQTAVTINQ VPGIQSCNSS ASRATIRGIR VDRSGLVEFA TESQQGSIAF HVWETSDPSG REDRRLLSWE ATPSLPLTTL EPVIYRVPTR PVAAPYILIE EIDTRGAHRM MGPFPVCDET LAEEFLNTEV RVAGNAALKA AAKQTARRGG HRESPSRTAA IPSSVPGSSD AAPVAVKIEV SSPGIVRVPV ADLVSLGMPP ALASHPELLR LTSLGVAVPF SIVPGTNGGD ALQFSADTLS SDYTDRNAVL LSWAWNPFAT PKVGLTRSGF ALEPGMVRIE RDRFYAPFAA PGADPWVWDF VAAPTASRTW SFDLPRPVSA GTDPVSVRIG FSGFTTHNHT VRAALNGLPV GETTIAGRTP GMILGQVPAG TVLGSGNQLS VQYTATSDNP DEAGLVFLDV VDVGVPLQPV TAEVSADRIT PFACALPPLN GVDYCIVTHG LFTDGARRIA EQKRNEGYNP AIVDVEVLYN RYSAGVPEPN ALRRFLRCAR VHSGGALRYV LLVGDDTFDP KDHLGRGLVS FIPSLNGMDE IFGRVPSENR YADLNDDGVP DLAIGRLPVS TVEQMESMAD KIVGQDALLA AGKGKHLFAV DNPGDDDPDF RQWAEQVAGT LPPETAIKWA DIAEGPAAAR AVLLQSLRTG AEATHYFGHG GFEIWSDDGL LTATDAAAQA GSGVGTVLFT WACQSQWYQY HLGLTVNEAL LLAPDGGAVA ALGPAGITPP ELQRMLSTNV YAGLKRGLTL GQAIRQAKAR AIRAGGFTRP VVDGWNLLGD PALRLNR
|
| |