Gene Sfum_2371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2371 
Symbol 
ID4459322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2920254 
End bp2924057 
Gene Length3804 bp 
Protein Length1267 aa 
Translation table11 
GC content68% 
IMG OID639703136 
Producthypothetical protein 
Protein accessionYP_846487 
Protein GI116749800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.217084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGGC TTCGGTCATC CATGGTTGGA GCGGCCCTGC TGCTCGTTGT GCTGCTTCTG 
TTGCCGGTCG ACTGCCGCGC TCAGCTCTGC TCCGACTTTC CCGACGGGGG AACCCTGACG
GGCGTCGTGA ATACCTATTA CCAGGGCTAT CAGTCCGCTT CCGCCGGCGC CACGCAAATC
CGGGTGGATG TTTCGACCAT CCGCGGGGCG GGAGCCTCCA TCGCCTCGGG CACCATGCTG
CTCGTGATCC AGATGCAGGA CGCCACCATC AATTCGTCCA ACAACAACCG CTACGGCGAC
GGCGGGACAG GCGCTATCGC CAACGGACAA ACCGACCTCC GCTCATCCGG CTATTTCGAA
TACGTCCTGG CGCAGGGCGC GCCCGACGCC AACGGCTACG TCAACATCAC CGGGGCGGGG
ACGGGCAACG GGCTGCTCCA CGCGTACTAC CTGGCCGCGG GCCCTCCCCA AAGGCGATTC
CAGGTGATCG TCGTCCCGCG ATACAAGACG GCGACCTTGA GCGGCTCGCT CACGGTTTCC
CCCTGGAACG GCAACAACGG GGGCGTGCTG GCGCTGGACA TCACCGGAAC GCTCACGCTG
GGCGGGACGG TCAGCCTCGA CGGGATGGGA TTCCGGGGGG GCGGCGGGCG TGCATTGACG
GGCGACAGCA GCGGCAGAAA TACCGACTAT CGCAGAGTCG TTACCGATAC GTGCCATGGT
TCCAAGGGCG AGGGCATCGC CGGAACCCCG CAGTACGTCT TCGACGGTTC CGCCGTCACA
AACACCACCG TTGACGGGTA CCCAAACGGA AGCCAGGCCA GGGGCGGTCC CGGCAACGCG
GCGGGAGGAG GAACGGACGG CAACCCGTCG ACCAACGATG AAAACAGCGG GGGCGGCGGC
GGCGGAAACG GCGGCCAGGG AGGTTACGGA GGAAATTCCT GGGACAGCAA CCTGGCTGTC
GGCGGGCATC CCGGCGCCGT GTTTCCGTAC GCGGTGGGGA CGAACGCTCG AATCGCCATG
GGCGGCGGCG GTGGAGCGGG ATCCCGCAAC AACTCGTCTG GATTCCAGAG CTCCGGCGGC
CCCGGAGGCG GCATCGTCAT CATCCGCGCC ACCGCCGTGA GCGGAACGGG CACGATCACG
GCAAACGGCA GAGGCCGCGA CATCGCCAAC ATCACCCCGG AGAACGACGG GGGAGGAGGA
GGAGGCGCCG GCGGAAGCAT CGTCGTCGTG ACGCGCGACG GGAACCTTTC CGGGCTCACC
GTGGAAGCCA GGGGAGGAGG AGGCGCGGAC GCCTGGCCGA CCGAGGCTCC CGGAGGCACT
CCCGGAGCCC GCCACGGACC GGGAGGCGGA GGCGGAGGCG GGGTCATCCT CCTGTCCGGC
GCGCCCGCAT CTTCCAGTGT CTCCGGCGGC GTCAACGGCA CCACCACCAC CGCCGCGGAC
GCTTTCGGCG CGACCGCGGG CAGCGCGGGC ACGGTTCAGA CCGCCGTCAC GATCAATCAG
GTCCCCGGAA TACAGTCGTG TAACAGCAGC GCGAGCCGCG CGACCATTCG CGGCATCCGC
GTCGACCGGT CCGGCCTGGT CGAATTCGCC ACCGAATCCC AGCAGGGCTC CATCGCCTTC
CACGTCTGGG AAACCTCCGA TCCGTCGGGC AGGGAAGACC GGCGGCTGCT GAGCTGGGAG
GCTACCCCGT CGCTGCCCCT GACCACGTTG GAGCCGGTGA TTTACCGGGT CCCGACCCGG
CCGGTCGCCG CGCCGTACAT CCTGATCGAA GAGATCGACA CGCGGGGCGC CCACCGCATG
ATGGGTCCCT TTCCGGTATG CGATGAAACC CTGGCCGAGG AATTTCTGAA CACCGAAGTG
CGCGTGGCCG GGAACGCGGC GCTGAAGGCG GCCGCAAAAC AAACGGCAAG GCGCGGCGGG
CACCGGGAAT CGCCTTCGCG CACGGCGGCG ATTCCCTCGA GTGTGCCCGG TTCGTCGGAC
GCCGCTCCCG TGGCCGTCAA GATCGAGGTC TCCTCGCCCG GGATTGTGCG CGTGCCCGTG
GCGGACCTCG TCTCCCTGGG GATGCCCCCC GCCTTGGCGA GCCACCCGGA GCTCCTGCGC
CTCACGAGCC TCGGGGTTGC CGTCCCGTTC AGCATCGTTC CCGGAACGAA CGGGGGAGAC
GCGCTGCAGT TCAGCGCCGA TACGCTCTCA AGCGACTACA CCGACCGCAA CGCGGTCCTG
CTCTCCTGGG CATGGAACCC GTTCGCCACG CCCAAAGTCG GGCTGACCCG TTCGGGTTTT
GCGCTCGAAC CCGGCATGGT GCGCATCGAG CGCGACCGGT TCTACGCTCC CTTCGCGGCG
CCCGGCGCCG ATCCCTGGGT TTGGGATTTC GTTGCGGCCC CGACGGCATC CCGCACCTGG
TCCTTCGATC TTCCCCGTCC CGTTTCCGCG GGAACGGATC CGGTATCGGT GCGGATCGGC
TTTTCCGGGT TCACCACTCA TAACCATACC GTGCGCGCCG CGCTTAACGG CCTGCCGGTG
GGCGAAACCA CCATCGCCGG GCGGACCCCG GGGATGATCC TGGGGCAAGT CCCGGCGGGC
ACCGTGCTCG GGAGCGGCAA CCAACTGAGC GTCCAGTACA CGGCAACCTC GGACAACCCC
GATGAGGCGG GCCTCGTCTT TCTCGATGTC GTGGACGTCG GCGTCCCGCT CCAGCCGGTC
ACCGCCGAGG TGTCCGCGGA CCGGATCACT CCCTTCGCCT GCGCCCTGCC GCCGTTGAAC
GGCGTGGACT ACTGCATCGT CACGCACGGC CTGTTCACCG ACGGGGCCCG GCGCATCGCC
GAACAGAAGC GCAATGAAGG GTACAACCCG GCGATCGTGG ACGTGGAAGT GCTCTACAAC
CGTTACAGCG CGGGCGTGCC GGAGCCCAAC GCGCTGCGCA GATTTCTGCG CTGCGCGAGA
GTCCATTCCG GCGGGGCGCT GCGCTACGTG CTCCTGGTCG GCGACGACAC CTTCGACCCG
AAAGACCACC TGGGCAGGGG GCTGGTTTCA TTCATTCCGT CCCTCAACGG AATGGACGAG
ATTTTCGGCA GAGTCCCCTC GGAAAACCGG TACGCGGATC TTAACGACGA CGGTGTTCCG
GACCTTGCCA TCGGGCGGCT TCCCGTCTCC ACGGTGGAGC AGATGGAGTC GATGGCCGAC
AAGATCGTCG GGCAGGACGC GCTCCTGGCA GCGGGCAAAG GGAAGCACCT TTTCGCCGTG
GACAATCCGG GAGACGACGA CCCGGACTTC AGGCAGTGGG CGGAACAGGT CGCCGGGACC
CTGCCTCCGG AGACCGCAAT CAAGTGGGCC GATATCGCCG AAGGCCCGGC GGCGGCACGG
GCTGTTCTTC TGCAGAGCCT GCGAACCGGG GCCGAGGCCA CGCATTATTT CGGCCACGGA
GGTTTTGAAA TCTGGAGCGA CGACGGGTTG CTGACGGCAA CCGACGCGGC CGCACAGGCG
GGCAGCGGCG TCGGAACGGT CCTTTTCACC TGGGCCTGCC AGAGCCAGTG GTATCAGTAT
CACCTGGGCC TGACCGTCAA CGAAGCCCTG CTCCTGGCCC CCGACGGCGG GGCGGTGGCG
GCGCTGGGCC CCGCGGGAAT AACCCCGCCC GAGCTGCAGC GGATGCTGTC CACCAACGTT
TATGCCGGCT TGAAGAGGGG ACTGACCCTC GGCCAGGCGA TCCGGCAGGC CAAGGCCAGG
GCGATCCGGG CGGGCGGTTT CACGCGCCCC GTTGTGGACG GCTGGAACCT GCTGGGAGAC
CCCGCTCTGC GTTTGAACCG GTAG
 
Protein sequence
MDRLRSSMVG AALLLVVLLL LPVDCRAQLC SDFPDGGTLT GVVNTYYQGY QSASAGATQI 
RVDVSTIRGA GASIASGTML LVIQMQDATI NSSNNNRYGD GGTGAIANGQ TDLRSSGYFE
YVLAQGAPDA NGYVNITGAG TGNGLLHAYY LAAGPPQRRF QVIVVPRYKT ATLSGSLTVS
PWNGNNGGVL ALDITGTLTL GGTVSLDGMG FRGGGGRALT GDSSGRNTDY RRVVTDTCHG
SKGEGIAGTP QYVFDGSAVT NTTVDGYPNG SQARGGPGNA AGGGTDGNPS TNDENSGGGG
GGNGGQGGYG GNSWDSNLAV GGHPGAVFPY AVGTNARIAM GGGGGAGSRN NSSGFQSSGG
PGGGIVIIRA TAVSGTGTIT ANGRGRDIAN ITPENDGGGG GGAGGSIVVV TRDGNLSGLT
VEARGGGGAD AWPTEAPGGT PGARHGPGGG GGGGVILLSG APASSSVSGG VNGTTTTAAD
AFGATAGSAG TVQTAVTINQ VPGIQSCNSS ASRATIRGIR VDRSGLVEFA TESQQGSIAF
HVWETSDPSG REDRRLLSWE ATPSLPLTTL EPVIYRVPTR PVAAPYILIE EIDTRGAHRM
MGPFPVCDET LAEEFLNTEV RVAGNAALKA AAKQTARRGG HRESPSRTAA IPSSVPGSSD
AAPVAVKIEV SSPGIVRVPV ADLVSLGMPP ALASHPELLR LTSLGVAVPF SIVPGTNGGD
ALQFSADTLS SDYTDRNAVL LSWAWNPFAT PKVGLTRSGF ALEPGMVRIE RDRFYAPFAA
PGADPWVWDF VAAPTASRTW SFDLPRPVSA GTDPVSVRIG FSGFTTHNHT VRAALNGLPV
GETTIAGRTP GMILGQVPAG TVLGSGNQLS VQYTATSDNP DEAGLVFLDV VDVGVPLQPV
TAEVSADRIT PFACALPPLN GVDYCIVTHG LFTDGARRIA EQKRNEGYNP AIVDVEVLYN
RYSAGVPEPN ALRRFLRCAR VHSGGALRYV LLVGDDTFDP KDHLGRGLVS FIPSLNGMDE
IFGRVPSENR YADLNDDGVP DLAIGRLPVS TVEQMESMAD KIVGQDALLA AGKGKHLFAV
DNPGDDDPDF RQWAEQVAGT LPPETAIKWA DIAEGPAAAR AVLLQSLRTG AEATHYFGHG
GFEIWSDDGL LTATDAAAQA GSGVGTVLFT WACQSQWYQY HLGLTVNEAL LLAPDGGAVA
ALGPAGITPP ELQRMLSTNV YAGLKRGLTL GQAIRQAKAR AIRAGGFTRP VVDGWNLLGD
PALRLNR