| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2316 |
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| Symbol | |
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| ID | 4459372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2846170 |
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| End bp | 2847483 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639703081 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_846432 |
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| Protein GI | 116749745 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.147685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGTG ATGAGAGGAA GGATTGGGGA CGCAGTATTG AGATCATGAG TCGAGGGGTC
AGCCGCCGGG ATTTCATCAT CACATCCATT GCCGCCGGCG TACTGACGAT GGTACCCAGG
TTTACGGGAG CGCAGGCGGG AGAACCTTAC AGGATAGGCG TTTTGCTGCC CACCACCGGC
AGCGGCGCGA ACTATTCGGA ACGCCCGATC AAGATACTGC CGCTGGTTGC CGCTCAGATC
AACGCCAGAG GGGGCTTCCT GGGCAAGCAC CCCATAGAGC TTTATTTTCG TGACACTCAG
ACGAAGCCCG ACGTTGGGGC TCGAGAAGCC AGGTCCCTCA TTCTCAACGA CAAAGTGAAA
ACGATTATAG GGACCTGGAG CAGCGCGGTT GCAATGGCGG TTCAGGAGAT CATACACGAG
CACAAGGTTC TGCACCTGAC CGCAACGAGC AACAGCTCAA AGATCGTGCA CGAGAACTTC
ACGCCCTACA CCTTCATGTT CGGCCCGGAC ACCAGGATGC AATCGGGAGC CACGGTGGTC
GCGGTGGCCA AGTTGATAAA GGAGAAAGGC TGGAAGAAGT ATGCGACCAT AGGACTGGAT
TACGAATGGG GGCGTGACGC GCAGAAAGTC TTCGTCGAGA ACCTCAAGGC GGCTTCTCCC
GGCACTGAAT TGATGAAGGA GCTCTGGGCA AAGCTTGGCG AAACCGATTT CACCTCGTAC
ATCACCGCCG TCATGTCGTT GAAGCCCGAT TTCCTGTTCG GGGCCATCGC GGGCAAAGAC
AATGAGACGT TCCTCCAGCA GGCCAAAGCC GCCGGACTTT TCAAGTCCGT GTCCTACCCG
GGGGTATTCC TGCCTGTGAC GGAATTGATG CAGCAGCGCC AGACCTTGCC TCGCGGCATC
ATCGGCTTGA ACCGGTGTCC GTTTTTCGCG CACATGGACA ACCCGATCAT GCAGAACTAC
GTCAAGATTT ATCAGGAGAA GTTCGGCAAG GACGATTACC CGGACGATTT TGCCTGTATG
TACGCCGATT CCTTGAACGC TCTGGACCAG GCCGTCACAA AGGCGTCGAC GGTGGAAACG
GAGGCGATAA GAAAAGCGCT GACGGGGGCG ACCGTCGACA CCTGCCGCGG CAAGCTGCCG
TTGCGCGACT GCAACAACCA GCTCGACGCT CCGTCGTATG TCGGCGAGGT CGTGGATACT
CCGGACTATC CATTCCCCAT TTTCAATCCC AAGACCATGA TCATGGTGCA AGGCCATGAG
GTTTGGGTAC CGACTTGTGA CGAGGTTCGC CGGCTGCAGA AGAAGAGAAC CTGA
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| Protein sequence | MSGDERKDWG RSIEIMSRGV SRRDFIITSI AAGVLTMVPR FTGAQAGEPY RIGVLLPTTG
SGANYSERPI KILPLVAAQI NARGGFLGKH PIELYFRDTQ TKPDVGAREA RSLILNDKVK
TIIGTWSSAV AMAVQEIIHE HKVLHLTATS NSSKIVHENF TPYTFMFGPD TRMQSGATVV
AVAKLIKEKG WKKYATIGLD YEWGRDAQKV FVENLKAASP GTELMKELWA KLGETDFTSY
ITAVMSLKPD FLFGAIAGKD NETFLQQAKA AGLFKSVSYP GVFLPVTELM QQRQTLPRGI
IGLNRCPFFA HMDNPIMQNY VKIYQEKFGK DDYPDDFACM YADSLNALDQ AVTKASTVET
EAIRKALTGA TVDTCRGKLP LRDCNNQLDA PSYVGEVVDT PDYPFPIFNP KTMIMVQGHE
VWVPTCDEVR RLQKKRT
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