Gene Sfum_2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2309 
Symbol 
ID4459400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2838581 
End bp2839030 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content58% 
IMG OID639703075 
Producthypothetical protein 
Protein accessionYP_846426 
Protein GI116749739 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCCG CATGGCATCT GTGGATGATT CTGGCAATAA TCCTCTTCAT AGCGGAGATT 
TTTACGCCCG CATTCGTGCT TGCGTCCTTC GGAATCGGCT GCATGGCCTC CTCGCTTGCA
GCGGGACTGG GCCTCGGCCT CAAGATGCAG ATTCTCGGGT TCATCGCAGG AACCCTCGTG
GCCTTCTTCA CCGTCCGGCC ACTGTTTACC CGGTATTGCT ACAAGGCGTC CCCGCACACG
CGAACGAACC TCGACGCACT GATCGGAACG ATCGGTCGCG TGACGGAAAC CATCGACGAT
GCGGGCGGTT CCGGTCGTGT CACGGTTGGA GGCGATGACT GGAAGGCCGT CGCCGCCAAT
GGAGAAACGA TCGAAATGAA TGCGCGGGTC GAAGTGATCG GGATCGAGGG GGTCAAGGTC
ATCGTAAGAC GCGCTCCGAC ATCGAAATGA
 
Protein sequence
MLSAWHLWMI LAIILFIAEI FTPAFVLASF GIGCMASSLA AGLGLGLKMQ ILGFIAGTLV 
AFFTVRPLFT RYCYKASPHT RTNLDALIGT IGRVTETIDD AGGSGRVTVG GDDWKAVAAN
GETIEMNARV EVIGIEGVKV IVRRAPTSK