Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2306 |
Symbol | |
ID | 4459397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2833763 |
End bp | 2834893 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639703072 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_846423 |
Protein GI | 116749736 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGGT TCGGCAGCCT TTGCGTGATG ATCCTGCTGG CCATAGTCCT GTCTGCATGT CCGGGTTTGG CCGCTGAATC CATCACCGTG GGAGCGATCT TCTCCCTTTC CGGGATCGCG GCGACGCATA ACGGGCCGCT GATTCCCATG CTGGAGCTTG CCGTCGAAGA GGTCAACGAA GGGGGCGGAT TGCAGGGGCG TCCGGTGAAG CTCGTGTTCC TGGACAATCA AAGCACCCCC ATCGGTTCCG TGAAAGCGGC CGAAGAAGCG GTCCGGCTGG GGATGACCGC CGTGATCGGC GCCCACTGGA GCTCCCATTC GCTGGCCATG GCTCCCGTTC TGCAGAAAGC GGGGATTCCC ATGATCAGTC CCGGTTCCAC TCATCCGATG GTGACCCGGG TCGGGGACTA CATCTTTCGC ATATGCTTCG TGGATTCCTT TCAGGGAAGA GCCATGGCCC GGTTCGCCTT TAAGGAACTG GGGGCCAGAA GGGTGGCGGT GGCCAAGAAC ATCGATGAGG ACTACAGCGC GATGCTGGCC GATTGCTTCT CGGAATCCTT TCAGCTCTAC GGTGGGAAGG TCGCATGTGA AGTCCAGTAT CGCGGCAAGG CGGTCGATTT TTCCGATATC ATGGAGCAGA TCAGGCGGGC CAGGCCGGAT GTCGTGTATG TTCCCGGTTA TACGCGAGAC AGCGGGCTGC TGATCCGCCA GGGGGTGTCC ATGGGAATAC GTGCCACGTT CCTGGGCGGT GATGCGTGGG ATGAGATTTC CATATACGCC GGGGATGCCG TTGAGGGCAG CTACCAGTCG GCGCCGTGGC ATCCGTCCGT TCCGCGTGCC GAGAGCCTTC GCCTGAAGGA ACTCTATTTC CGGAAGTACG GCGCGGAAAT CAAGAGCTTC AGCGCGCCCC TGGCCTATGA CGCCGTGATG CTTCTCGTGG ATGCGATCAG GAGGGCGGGG ACGTCGGATC GAGCCAGGAT CCGGGATTGC CTGGCGGGCA CCCTGGACTT TCGGGGAGCG ACCGGACTGA TAAGCTATCA CGGCGGGGGA GATCCGATCG ACAAGGAAAT CGTGATGTTG AAATGGGAGA AAGGGAGCCC CAGGTATTAC CAAACCATCA AACCGGAATG A
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Protein sequence | MRRFGSLCVM ILLAIVLSAC PGLAAESITV GAIFSLSGIA ATHNGPLIPM LELAVEEVNE GGGLQGRPVK LVFLDNQSTP IGSVKAAEEA VRLGMTAVIG AHWSSHSLAM APVLQKAGIP MISPGSTHPM VTRVGDYIFR ICFVDSFQGR AMARFAFKEL GARRVAVAKN IDEDYSAMLA DCFSESFQLY GGKVACEVQY RGKAVDFSDI MEQIRRARPD VVYVPGYTRD SGLLIRQGVS MGIRATFLGG DAWDEISIYA GDAVEGSYQS APWHPSVPRA ESLRLKELYF RKYGAEIKSF SAPLAYDAVM LLVDAIRRAG TSDRARIRDC LAGTLDFRGA TGLISYHGGG DPIDKEIVML KWEKGSPRYY QTIKPE
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