Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2305 |
Symbol | |
ID | 4459396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2832559 |
End bp | 2833701 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639703071 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_846422 |
Protein GI | 116749735 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCATG GCGAACTGCA GGGGAACGCG ATGAGGGGCG CCTTTTGGAT GTTCATCGCG CTGGCCGCGG CCGTTGCGGC GTTTCCCGCG CAGGCCGCGG ATGTCATCGA GATAGCGGCC ATCTATGCCT TGACCGGGGA AGCCACGGAC ACCAACGCAA CCTCCGTTCG GGGCGTGCGG ATCGCGGTGG AGGAAATCAA CGCGCGCGGC GGCGTTTTGG GCCGACGGCT CCGACTGGAG ATCCACGATA ATCGGAGCAC CCCCATCGGC TCCCACCTCG CGGCGGAGCG GGCGGCGGAT TCCGATGCCG TCGCCATATT GGGTGCGTCC CGGAGCCCGC ATTCACTGCC GATTGCAAAA GTGGCTCAAG CCCGAGGTGT GCCGATGATC ACGAACCATT CGACCGATCC TGATATCACG CGGGTGGGCA ACTGCATCTT TCGCGTCTGC TTCACCGACG AGGTCCAGGG CGCCGCTCTG GCGCGATTCG CGCGAGAAGA CCTCAAGGCC TCCACCGCAA CCCTGTTCGT CAATCTGGCA AGCGAGTACA GCACCGGGAT TTGCCAGGTC TTCCAGAAAC ACTTTGAACA GCTGGGCGGC AGGGTGATCC TGGTGAGGGA ATACAAGTCC AGGCAGAGGG ATTTCGAGGA TCTGGTCCGG GACGCGGGCC GCGTGCAGGC GGACGTTCTT TTCCTGTCGG GATATGACGA AAGCGGTCTC ATTGCCGTAC TCGCCCAGGA CAAAGGGGTG ACATCCAAAT TTGTGGGCGG AGACGGTTTG GCCAATCCGA GCTTTCTGGC CAAGGGTGGA GACCGTCTCA AACGGGCGTA CTACTCATCG CACTGGACAC CGGCCATGGA TTCACGGCGG TCGAGGGAAT TCACGGCACG ATACGGCGAC GTGCCCGATT TCGGCACCGG GACGGCCCTG GCCTACGACG CGGTCATGGT ATTGGCTGAT GCCATCAAGC GGGCGGGTTC CGCGGAGCGG GGCAGGATTC GTGCCGCACT GGCCGAGACA CGCTCCTTCG AAGGCGTGAC GGGGGTCATT TCCTTCAACG GCCATGGAGA TCCGGTCAAG AGCGTGGTGA TCATGGAGGT CAGGGACGGA CGGCCTCACT ATTTGAAGAC GATGCTTCCC TGA
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Protein sequence | MDHGELQGNA MRGAFWMFIA LAAAVAAFPA QAADVIEIAA IYALTGEATD TNATSVRGVR IAVEEINARG GVLGRRLRLE IHDNRSTPIG SHLAAERAAD SDAVAILGAS RSPHSLPIAK VAQARGVPMI TNHSTDPDIT RVGNCIFRVC FTDEVQGAAL ARFAREDLKA STATLFVNLA SEYSTGICQV FQKHFEQLGG RVILVREYKS RQRDFEDLVR DAGRVQADVL FLSGYDESGL IAVLAQDKGV TSKFVGGDGL ANPSFLAKGG DRLKRAYYSS HWTPAMDSRR SREFTARYGD VPDFGTGTAL AYDAVMVLAD AIKRAGSAER GRIRAALAET RSFEGVTGVI SFNGHGDPVK SVVIMEVRDG RPHYLKTMLP
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