| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2299 |
|---|
| Symbol | |
|---|
| ID | 4459390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 2823635 |
|---|
| End bp | 2825092 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639703065 |
|---|
| Product | fibronectin, type III |
|---|
| Protein accession | YP_846416 |
|---|
| Protein GI | 116749729 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCC TGAAAAGGTC CTTGCATGGG ATCGTGTTTT GCGCGTTGGC GTTGTTCCTG
GCATCGGGTT GGATCGTGTC CGGAGCCGGA GCCGGCCCGG ACGGGCAGGG CACCGGAGTG
TCGACCGGCC TGGAAGGAGA GGACCGGCCG GCAGCGCGGC GTCCCATGAG CCGGTCAAAT
CCGCAGGGGA ATCCTTTGCA GGATTCGAAC CAGCCTGTCG GCATCGCCGT CGATTCACAA
GGCAACGCCT ATGTCACGGG ACAATGGGTC AATACGTCCG GCAACTCCGA TTTCGCGACG
ATCAAGTATT CCAAAGCCGG TGCGGCGGCC TGGGTGAGAC ACTACAACGG CCCGGCCAAA
GGCGACGACC TTGCAGGCGG AATCGCCGTG GATTCCGCGG GAAACGCCTA CGTCACGGGA
GCTTCCCCAG GGACGGGCAC TCAAGAGGAT TTTGCGACCG TGAAGTATTC AAGGAGCGGC
GAGCAACAAT GGATCAGGCG ATACAACGGA CCGGTATCGA GGTCCGACTG GCCGACCGGG
ATCGCCGTGG ATTCCTCCGG CAACGCCTAT GTCACGGGCG ACAGCCAGGT GTCCGACACC
CGGTGGGATT TCACCACGGT GAAATACGAT TCGGCCGGCA AGCAACTCTG GGCGAAGCGC
TACAACGGTC CTCTCAAAGG GTCGAGCAGG CCGTCGGGCA TCGCGGTGGA TTCCTTCGGA
AACGCCTATG TGACGGGGAC ATCCCAGTCA GGAGAATCGG AATTTGATTT TGCGACTGTC
AAGTACGACT CCTCCGGCAA ACAGATTTGG GCCAGGCGCC ACACGCGAAG CGGCAGTTCC
GTCAACTACC CCGTGGGGCT GGCCGTGTCC AAGAGTTCCG TGTACGTATC GGGCGGCACT
CAAGGAAGCT CCTCTTCGCA GGATTACACC ACGGTGAGCT ACGACAAGAC GACCGGCAAC
CGGAAATGGG TGAAAAATTT CGACTCGGGC ACAGGGAACG ATAACCCGAG CGCGGTCGCG
GCCTGTGGAA ACGTGGGCGC ATATGTGACA GGGTCATCGG GCGACGGGGA TTTCCTGACC
GTCAAGTATG ATTCCTCGGG CGCCCTCGTG TGGACGAAAA GGTACAACGG GCCTGCCCGC
GGCTCTGACT TTGCACGGGC CATCGCCGTG GACTCGAGCG GAGCCGCCTA TGTGACCGGA
CAATCGGACG GATCGGGCAC CGGCACGGAC TTTGCCACCA TAAAGTACGG ACCGGGGGGC
AAGACGTGTT GGGTGCAGCG ATTCAACGGG AAGGGGAACG GCCAGGACAC CCCGAGCGCC
ATCGCCGTCG ACAGTGCCGG GAACGTTTAC GTGACGGGCC AGTCGCAATT GTCCTCCTCG
GACGATTTTG GCTTCGCGAC CGTCAAGTAC GACTCCAGCG GCAAACGAAC CTGGGTCAAA
TACTATTCCG GGCAATAG
|
|---|
| Protein sequence | MDFLKRSLHG IVFCALALFL ASGWIVSGAG AGPDGQGTGV STGLEGEDRP AARRPMSRSN
PQGNPLQDSN QPVGIAVDSQ GNAYVTGQWV NTSGNSDFAT IKYSKAGAAA WVRHYNGPAK
GDDLAGGIAV DSAGNAYVTG ASPGTGTQED FATVKYSRSG EQQWIRRYNG PVSRSDWPTG
IAVDSSGNAY VTGDSQVSDT RWDFTTVKYD SAGKQLWAKR YNGPLKGSSR PSGIAVDSFG
NAYVTGTSQS GESEFDFATV KYDSSGKQIW ARRHTRSGSS VNYPVGLAVS KSSVYVSGGT
QGSSSSQDYT TVSYDKTTGN RKWVKNFDSG TGNDNPSAVA ACGNVGAYVT GSSGDGDFLT
VKYDSSGALV WTKRYNGPAR GSDFARAIAV DSSGAAYVTG QSDGSGTGTD FATIKYGPGG
KTCWVQRFNG KGNGQDTPSA IAVDSAGNVY VTGQSQLSSS DDFGFATVKY DSSGKRTWVK
YYSGQ
|
|---|
| |