Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2247 |
Symbol | |
ID | 4459443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2763203 |
End bp | 2765416 |
Gene Length | 2214 bp |
Protein Length | 737 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639703013 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_846364 |
Protein GI | 116749677 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCAGC GAACGTTTCT GATCCTTGTC GCAATCCTGG TCCCCGTCGC TTTTATTGCC GGCTGGTACG CAAGCCGGGG GAGCGGGGGT ACCGGGGGGG CCGGGGATCG GAAGCTCCTC TACTACGTGG ACCCCATGAA TCCCTCTTTC CGTTCGCCGG AACCGGGGAC CGCGCCCTGC GGGATGCCGC TCGAGCCCGT CTATGCCGGC GGGGCCACGC CGGGCGGGGT TGGGACAACC CCTCCGGGGG CTGTGACGGT CCGCGCCGAC CGGTTGCAGC TCATCGGCGT GGCGCGCGAA GCGGTCCGAT CCGGCACCCT GCGTCACACC CTGCGGCTGG TGGGGACCGT AGCTCCTGAT GAGACGCGGC TCTTCCGGGT CACGGCGGCG ACCGCCGGGA GGATCCGCGA GATGGGCGCG GCGACGACCG GGAGTCTCGT GAACAAGGGC GAAATCCTGG GCTCGTACTA CTCCGGTGAA CTGCTCGTCC CCCAGCAGAA TTTTCTTCGC ATGTTCGAAA CCTATCAGAA CGTGCAGAAG GGTGGCACGA ATCCTTACGA CAACTTCCAG GGCGGCGGCC AGCTCGCGAC CTACGTGCGG AACGTGGACG TGGCTCGCCA GGCGCTCCTG AATCTGGGCA TGACCGCGGA ACAGGTGGAA GAGGTTGCGG CAACACGCCA GCCCGCCTAT CTCGTGCAAA TCCGAGCCCC TGCCGCTGGG ATCGTCACCT CGCGCAACGT CTCCCTCGGG CAGTCGTTCG ACGCGCGTGC GGACCTGTTC ACGATCGCGG ATCTCAGCCT CGTCTGGGTG CTCGCCGACG CCTTTGAGGG GCAGGAGGAG CACTTCAAGG CGGGCACACG GGCGATTGTG ATGCAACCCG GAGCGGGCCG CAGGTTCGCG GCCGTGGTCA GCGGGGTCCC ACCCCGGTTT GAAGCCGCCA CCCGGACGCT CAAGGTTCGT CTCGACGTCG TCAACCCCGG CCTCCTTCTT CGCCCCGACA TGCTGGTGGA CGTCGAGCTT CCCGTCGAGA TCGGCCCCGG CCTTTTCGTT CCCAAGGGGG CTGTGATCGA CTCCGGAACG CGCCGGATCG TCTTCGTGGA GCAGGGCGAG GGCGTGTTCG TGCCCCGCAC GGTCCGCGCG GGGCGGCGGC TCGGCGAACG AGTCGAGATC GTCGGCGGCC TCATGGAGGG TGAGACGATC GTTACCGCCG GGAACTTCCT TCTCGATTCC GAGAGCCGGA TGCGGGCTGC AGGGGCCGCT GTGGCCGGCA TGGCACTCGA CCCCATCTGC GGCATGGAGG TGGATGAGAC CAGGGCGCGG GCGAACGGGC TTGTGAGCGA ATATGGGGGA ACGACCTGGT TCTTCTGCGC GCCGGTCTGC AAGCAGGAAT TCGACAGCGA TCCGAAGGCG GCGGCCGCCA AGGCCGAGGG CGTAAAGGAG GTTGCGGCGC AGGAGCGGCA GCCCGCCAAC GGCATTGGGA CAAAGGCGTT CCACATGGAG GACCCGGTCT GCGGCATGGA CGTGGACCCG GACGAAGCAA GCCGCGCCGG GCTCATCAGC ACCTTCCAGG GAGCGCCCTT TGTCTTCTGC TCCCCGGAGT GCAAACAGGA GTTCGACAAG GACCCCCGGG GCGTTCTTTC CCGTCCCGCC GGGGAGCGCT CCATGCCCCC CGCTGTTTCG GCCCCTCACG AGGATGGGCA GCACGGGATG CCTCCGTCGA TGCAGGAGAA GACGCCACCT CCGGCTCCGC AACCGGAGCA GATGCCCATG CGGGCACCCG CCCGCGGTGA CGATGAAAGC CACGGAGCGG CGTCCGCGGA GCCCATGCGA ATGCAGGTCG ATCCGGTCTG CGGCATGCGG GTCGACTCGC TGAAGGCCCG GGCAAAGGGG CTTGTGAGCG AATATGGGGG AAAGACCTGG TTCTTCTGCG CGCGGGTCTG CAAGAAAGCG TTCGATCGCG ATCCACAGGC AGTGGCTGCC AAGGCACAGG GGGTGAAGGA GTCCGCGGAG CAGGAGCGTC GGCTGCCAAA CGCTCACGAG AGCATGGCGT CCCGGATGGA AGACCCGGTT TGCGGCATGG AAGTGGATCC GGTGGAGGCC CGGGAGCAGG GTCTGCTGAG CGAGCACGCG GGAAAGACCT GGTTCTTCTG TGCGCCGGAG TGCAAGCAGG CGTTCGACGC CGATCCGACG GTCTACCCGC AGGTGGTCCG ATGA
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Protein sequence | MRQRTFLILV AILVPVAFIA GWYASRGSGG TGGAGDRKLL YYVDPMNPSF RSPEPGTAPC GMPLEPVYAG GATPGGVGTT PPGAVTVRAD RLQLIGVARE AVRSGTLRHT LRLVGTVAPD ETRLFRVTAA TAGRIREMGA ATTGSLVNKG EILGSYYSGE LLVPQQNFLR MFETYQNVQK GGTNPYDNFQ GGGQLATYVR NVDVARQALL NLGMTAEQVE EVAATRQPAY LVQIRAPAAG IVTSRNVSLG QSFDARADLF TIADLSLVWV LADAFEGQEE HFKAGTRAIV MQPGAGRRFA AVVSGVPPRF EAATRTLKVR LDVVNPGLLL RPDMLVDVEL PVEIGPGLFV PKGAVIDSGT RRIVFVEQGE GVFVPRTVRA GRRLGERVEI VGGLMEGETI VTAGNFLLDS ESRMRAAGAA VAGMALDPIC GMEVDETRAR ANGLVSEYGG TTWFFCAPVC KQEFDSDPKA AAAKAEGVKE VAAQERQPAN GIGTKAFHME DPVCGMDVDP DEASRAGLIS TFQGAPFVFC SPECKQEFDK DPRGVLSRPA GERSMPPAVS APHEDGQHGM PPSMQEKTPP PAPQPEQMPM RAPARGDDES HGAASAEPMR MQVDPVCGMR VDSLKARAKG LVSEYGGKTW FFCARVCKKA FDRDPQAVAA KAQGVKESAE QERRLPNAHE SMASRMEDPV CGMEVDPVEA REQGLLSEHA GKTWFFCAPE CKQAFDADPT VYPQVVR
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