Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2195 |
Symbol | |
ID | 4459496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2691270 |
End bp | 2691776 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639702961 |
Product | NLP/P60 protein |
Protein accession | YP_846312 |
Protein GI | 116749625 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGTTGG CTCTCGCTCC ATGCTTTCTT GTGCTCGTTT TGGTGCTCGG CCTCTGCGCG GGGTGCGGCG GACTCCGGCC GGACGCCGTG CCCGAGATGC GCCCCTGCCC GCCGGGAGAC GTCGTCTGCA CGGCACGCTC CCAGATCGGC AGGCCTTACC GCTTCGGGGG CTTCTCGCCC GATTCCGGGT TCGATTGCTC CGGGTTCACC TGGTGGGTTT ATCACCAGCA CGGGGTGAAT CTGCCGAGGC AATCGCAGGA CCAGGCTGCA TTCGGCCTCC CGGTGTCGCC CGAGGAGCTG CTGCCGGGAG ACCTGGTCTT TTTCGAAGAA TGGCGGAAGG GAGCGTCCCA CGTCGGGATC TATTCCGGCC GCGACCGTTT CATTCACTGC CCCAGCTCGG GAGGACGCGT CAGGGAGGAG CGGTTCTCGG ACCGCTACTG GCGGAGGCAC TACCTGGGAG CATGCAGAGT CCTTCCGGGC CGGGAGGGTG CCGGGGACTC TCCGTGA
|
Protein sequence | MRLALAPCFL VLVLVLGLCA GCGGLRPDAV PEMRPCPPGD VVCTARSQIG RPYRFGGFSP DSGFDCSGFT WWVYHQHGVN LPRQSQDQAA FGLPVSPEEL LPGDLVFFEE WRKGASHVGI YSGRDRFIHC PSSGGRVREE RFSDRYWRRH YLGACRVLPG REGAGDSP
|
| |