Gene Sfum_2195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2195 
Symbol 
ID4459496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2691270 
End bp2691776 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content67% 
IMG OID639702961 
ProductNLP/P60 protein 
Protein accessionYP_846312 
Protein GI116749625 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTGG CTCTCGCTCC ATGCTTTCTT GTGCTCGTTT TGGTGCTCGG CCTCTGCGCG 
GGGTGCGGCG GACTCCGGCC GGACGCCGTG CCCGAGATGC GCCCCTGCCC GCCGGGAGAC
GTCGTCTGCA CGGCACGCTC CCAGATCGGC AGGCCTTACC GCTTCGGGGG CTTCTCGCCC
GATTCCGGGT TCGATTGCTC CGGGTTCACC TGGTGGGTTT ATCACCAGCA CGGGGTGAAT
CTGCCGAGGC AATCGCAGGA CCAGGCTGCA TTCGGCCTCC CGGTGTCGCC CGAGGAGCTG
CTGCCGGGAG ACCTGGTCTT TTTCGAAGAA TGGCGGAAGG GAGCGTCCCA CGTCGGGATC
TATTCCGGCC GCGACCGTTT CATTCACTGC CCCAGCTCGG GAGGACGCGT CAGGGAGGAG
CGGTTCTCGG ACCGCTACTG GCGGAGGCAC TACCTGGGAG CATGCAGAGT CCTTCCGGGC
CGGGAGGGTG CCGGGGACTC TCCGTGA
 
Protein sequence
MRLALAPCFL VLVLVLGLCA GCGGLRPDAV PEMRPCPPGD VVCTARSQIG RPYRFGGFSP 
DSGFDCSGFT WWVYHQHGVN LPRQSQDQAA FGLPVSPEEL LPGDLVFFEE WRKGASHVGI
YSGRDRFIHC PSSGGRVREE RFSDRYWRRH YLGACRVLPG REGAGDSP