| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2158 |
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| Symbol | |
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| ID | 4459512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2639444 |
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| End bp | 2644696 |
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| Gene Length | 5253 bp |
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| Protein Length | 1750 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639702924 |
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| Product | NHL repeat-containing protein |
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| Protein accession | YP_846275 |
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| Protein GI | 116749588 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTTTTC TTGCGATCCT CTTATTCCCC GGTCCTTCCT CCGCCGAGCG AGTGGTCGAC
ACCGTCGCGG GACTCCAATC CGACGACGGT CCGGCCCTCG AGGCCAACCT GGATTCGCCT
TCCGGTGTTG CCGTCGACAC CTCGGGGAAC GTCTACCTGT CGGACACCAA CAATCATCGG
ATCAGAAAGC TGGATGTGGC CGCCGGTCAG ATTCAAACCC TGGCGGGCGG GCAGTCCCCG
GGTTATTCCG GCGACGGGGG GACCGCGGCG AAGGCCGGGT TGAACCGGCC CAGGGGCATT
GCCGTCGACG CCGCAGGCAA CGTCTATTTC GCGGATTCCA ACAATCACTG CATTCGAAAA
ATCGACACCT CCGGCATCAT CACGACCGTG GCCGGAACCG GATCCGCCGG TTCGAACGGG
GACGGGGGGC CTGCCGCTTC CGCTCGACTG GCCTACCCGT TCGGCATCGC CGTCGATCCT
TCGGGAAATA TTTATGTCGC CGACCTGGGC AATCACAAGG TCCGAAGAAT AGATGCCGCC
GGGAATATTT CGACCGTTGC CGGAACGGGC TTATTGAGCA GATTGGGAGA CGGGGGACCG
GCAACTGAGG CAGGCCTCAC AAGCCCGACG GGAGTAGCCG TCGACGGTTC CGGAAACCTG
TTCATCAGCG ACAGCGGGCG CCATGTCATC AGGAGAGTGG ATGTCGGCGG CACAATCGAC
AGGGTCGCGG GTGATTATGA ACAACGCTAT CACGGTGACG GCGGTCCAGC GCTCAGCGCC
GGCTTGATGA ATGCCTACGG AGTGGCCCTC GGTCCAAACA ACGACCTCTA CATCGCGGAC
ACCTACAATC AGAGAATCAG GAAAGTCACC GACGGCGTCA TAAACACGGT GGCGGGAACC
GGCTACGGCG GATCGCTCGA GGACGGGATT CCGGCCACCG GCGCAAGGCT CAAGTCTCCT
GTTGCGCTGG CGGTGGACTC TCAGAACAAT ATTTATATCG CGGACACTTA CAGCCATCGC
ATCCGGAGAG TGGACGCCGC GGGCAACATC GTCACCGTTG CGGGCAAAGG AGTTCCCGGC
AATGCGGGAG ACGGCGGGCA GGCCGTTGCC GCGATCCTCA AATCCCCTCA CGGGCTTGCT
TTGGGCCCGG ACAATTCGCT CTACATTGCG GATCGAACGG ACCATCGCGT CCGAAAGGTT
ACTGCGGCCG GGGTCATCAG CACGCTGGCG GGGACCGGGG AGGAAGGCTT ATCGGCTGAC
GGCGCTGCCG CTGCGTTCGC CAACCTGGAC GGTCCTTGCG CCGTTGCCGT CGGTCCTTCG
GGAAGCGTGT ACTTTTCGGA TTCGGGGTCC AACCGGGTCA GGAAAATCGG GCTGGACGGC
AATCTCTCCA CCGTGGCGGG GAAGGGAGTT GCGGGGTACT CCGGCGATGA CGGCCCCGCT
GCCGAAGCCC GTCTCAACAA CCCGAGCGCC ATTGCCGTGG ATGGTTCCGA GAGCATCTAC
ATCGCCGACA CCAACAATCA TCGAATCAGG AAGGTGGACG GCGGCGGCAC CATCACCACG
GTGGCCGGCA ACGGCACGCC GGGCTATTCG GGGGACGGGG CCTCCGCCAC GGCCGCGTCC
CTCAACTTTC CCAACGGGGT CGCGGTGGAC GCCGACGGCA ACGTCTTCAT CGCGGACACG
TCCAATCACC GTGTCCGGAT GGTGGATTCC GGGGTCATCA CCACGGTGGC CGGCAACGGC
ACGCCGGGCT ACTCGGGAGA CGGCGGTGCC GCCGTGTCCG CCTCTCTGAA GGCTCCCCAC
GGCGTGTGGG TCGACGCCAC GGGAGCATTG TACATTGCGG ATGCCCACAA CTATCGCGTG
CGAAAAGTGG CGGGTGGAAA CATCGTTACC GTAGCGGGAA CGGGAACCCC GGGCTATTCG
GGCGACGGAG GGCTTGCCGC GGCCGCGGAT TTCCGGTCCG TGCACGGACT GGTGGTCGAC
GGCTCGGGGA ATTTGTTCGT TGCGGACATG GAGAACTCAC GCGTCAGGAA GGTGTATGAA
GGCTTCCCGG CGATCCCGAC GACCCGCACG GTGTGCTCCG CGGGGTGCGG CTACACCTCC
ATTCAGGCGG CGATCAATGC CTCCACGGAC CGGGACACGG TGCTGGTGGG ACCGGGCACA
TACGCCGAAA ACCTGAACTT CGGCTCGAAA GGTGTGGCGG CGGTTTCCCT GGAGGGGGCC
GAAGGCACCA TAATCGATGG AAACGGTTCG GGCACCGTGG TGAGGTTTGA TTCGGCCGGT
TCCTACCAGG CCCGGCTCGC GGGGTTCACT GTCAGGAACG GCCGGGCGGC TTCCGGAGGG
GGCATCCGGA TCAGCGGCGC TTCCCCAACC ATCGAGGACT GCATCGTCAC GCAAAACGAG
GCGGTTTCAG CGGGCGGGGG ACTGTACCTG GAAAACGGGG CCGCGCCGAT TCTGCGGAAT
TGCGTCGTGA CCCTCAACAC GGCGGCCTAC GGTGGAGGCA TTTACTCCTC CGGCAGTTCC
CCCCTCATTC AATCCACAAC CATCTCGCTC AACACTGCCG GCAACGGTGG CGGCGGGGTT
TTTGTCTCTG CCGGAAGTCC GACTTTCATG GGAGGCGTGA TCCGGGAAAA CACCGCCACC
CTGGGCGGGG GCGGGGGTGC GGCATTCGCG AATTCCGCCA GGCCCGTCGT GCAGCGGTTC
CACATTGACC ATAATGAAAG CGCCTCCGTC GGGGGCGGGC TCCATGTCTA CGGCGGCTCC
GACCTGTTGG CGGCGAACAC CGTCGTATCG TCCAACACGA GTTCGTCCGG CGGCGGAGGC
ATGCATGTCG ACGGAGCCAC TGCTTCCGTC TACAGCCTGA CCTTCGCCGA AAACACCGGG
GACCCCGCGG CGGGAGTCTA TTCAAGAAAC TCCACGGTTC GCATTCAGAA CTCCATCCTT
TGGGACACGA GTGCCGCATT GGGTTACGAG GGCACCGAAC CCACGGTGAG CACCTCGGAC
GTCCGGATGT CCGGCGGCAC GTATCCCGGT ACCGGGAACG CCAATGCCGA TCCTCTGTTC
AAGGCCGGGG ATGCGCAATG TCATCTTCAG GCCGGGTCGC CGTGTGTCAA TGCGGGCGGG
ATAGCCGATT CACCCGCGAT CGACACCGAT CTCGACATAG ACGGCCAGAT CCGGTCCCGA
CTCGGTACAG GCGGCATCGA CATGGGGGCG GACGAAGTCT CTTCCTGCAC TCCCGTCGCG
ATCGCCCAGG ACGTTACGGT GGAACAGGAT CAAAGCCTGG CCGTCACATT GGAGGCAACC
GACACGTACG GCAACGCCCT GGCATACACT GTCACGCAAT CTCCATCCCA CGGCGCGCTG
AGCGGCGCCG CTCCCGATCT GACGTACACT CCCGTCACGG GCTATGTGGG TTCGGACACT
TTCAGATTCA GGGCGGGCAA TGATTATGCC ACATCCGCCC CCGCCGTCGT CGCGATCACG
GTCAAGAGGC ACAACAATCC GCCGGTCGCG ACCCACGGTT CCCTGGCGAC CGACGAAGAC
ACTCCGGCAA GCGCGCACCT CGCCGGCACC GATCCCGACA GTGACGATCT GACGTATTCG
ATTGTCGTCG AACCGGTGAA TGGCACGGTG GTGATCGACG ACGCCGCAAC AGGCGCCTAT
ACGTACACTC CGAAACGCAA CGGCTCGGGC TCGGACGCAT TCACCTTCAG GGTGTGCGAT
CCTTTTTCCT GCGCCGTGGT TCCCGGGATC ATGGAGGTGA CCGTCAGGCC GGTGAACGAT
CGGCCGAGGA TTTCAACGAT TGAGCCCCAG ACCATCTCGG AAGACGCGCA TACCGGCGCG
CTCCCGTTCA CGGTCGGCGA TGTCGAAACC CCCGCCGAAG CCCTGGCGGT TACGGGCAGG
TCGTCGAACA CCGCCCTGGT CCGCAACGCC GACATCGTTT TCCGGGGTGA GGGAGAGAAT
CGCACGGTGA CCGTGACTCC ACTGCCCAAC AGGAACGGAA AGGTTTATAT CACCCTGACG
GTCAACGACG GGTTGTTGTC CGCGCAGAGG ACATTCCTCC TCACGGTCAC TCCTGAAGAC
GATCCGCCGA CAATCACCCC GATCGAGTCG GAGCGGACCA GGGAGAACGT CCCGACGCCG
CCCGTAGCTT TCCAGGTCGA TGATATCGAC AATCCGGTCG AGACGCTTAA AGTCTCGGGC
AGGTCCTCAA ATACGGCCCT GGTTCCCGAC AGGAACATCG TCTTCGGCGG TTCCGGCGCA
TCCCGCACGG TGACCCTGAT TCCGGCTCCC GAGCGGAACG GGACCACGAC GATCACGCTC
ACGGTGAGCG ATGGAGCGCT GCACGCCGAC ACTTCCTTCA CGCTCACGGT GCTTCCGGTG
AACGGCCGGC CGATCGCCGA CGCCGGACCG ACTCAGAAGG TGAAAGAGGG TGCCGTGGTG
ATTCTCGAAG GGTCCAATTC CATCGACCCG GAACGAGAGA TCGTTTCTTA TGAGTGGACT
CAGGTTGGGG GACCGCCGGT GACACTGCGG TCGGGGCCCG AGGGCAGGAG GGCGAATTTC
ACCGCACCCG GGGGCGACCC GGATGGGATG TCCCTGCTCT TCAGGCTGAC GGTGAAAGAC
GAGGGGGGAC AGTCCGCATC GGATACCTGC ATCGTCAATG TGACCCGGGC GAACAGGCCG
CCCGTCGCAA ACGCGGGTCA GGACCGGACC GTGCATGCCG GGGACGTGGT GACGCTTGAA
GGTTCGGCCT TGACGGAAAA GGGAATGGAA ATCGCCTCAT ACAAGTGGAC GCAAATCAGT
GGGCCGCGGG TGTCGCTGTC TCCCTCCCCA TCCGGCGACA AGGTGTCTTT CGCGGCGCCC
GAGCCCGACT CGGTCGGCGT GTCCCTCATG TTCCGACTGA CGGTGAAAGA TCACCGCGGG
CTGCGTTCCC GCGACGAGTG CATTGTCAAC ATCACCGGCA GGAACCACAC GCCTGCGGCA
GAGGCCGGGG GCAACCGGAC GGTTCAATCG GGCGCCGAGG TCGTGCTGAA CGGGTCCGGG
TCCTCGGACC CGGATGACGG CGTGGCGGGC TACCTCTGGA GTCAAACGGA GGGGCCCCCC
GTGGTGCTTT CAGACCCGAC GGCGGCCCGG CCTGTTTTCA CGGCACCGAG GGTGTCTCAA
TCGACTCGGC TGGTCTTCCG GTTGATCGTG ACCGACCACT ACGGTTTGCG TTCCAGGGAC
TCGTGTGTTG TGACCGTGAA CCCTTTCGAT TGA
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| Protein sequence | MIFLAILLFP GPSSAERVVD TVAGLQSDDG PALEANLDSP SGVAVDTSGN VYLSDTNNHR
IRKLDVAAGQ IQTLAGGQSP GYSGDGGTAA KAGLNRPRGI AVDAAGNVYF ADSNNHCIRK
IDTSGIITTV AGTGSAGSNG DGGPAASARL AYPFGIAVDP SGNIYVADLG NHKVRRIDAA
GNISTVAGTG LLSRLGDGGP ATEAGLTSPT GVAVDGSGNL FISDSGRHVI RRVDVGGTID
RVAGDYEQRY HGDGGPALSA GLMNAYGVAL GPNNDLYIAD TYNQRIRKVT DGVINTVAGT
GYGGSLEDGI PATGARLKSP VALAVDSQNN IYIADTYSHR IRRVDAAGNI VTVAGKGVPG
NAGDGGQAVA AILKSPHGLA LGPDNSLYIA DRTDHRVRKV TAAGVISTLA GTGEEGLSAD
GAAAAFANLD GPCAVAVGPS GSVYFSDSGS NRVRKIGLDG NLSTVAGKGV AGYSGDDGPA
AEARLNNPSA IAVDGSESIY IADTNNHRIR KVDGGGTITT VAGNGTPGYS GDGASATAAS
LNFPNGVAVD ADGNVFIADT SNHRVRMVDS GVITTVAGNG TPGYSGDGGA AVSASLKAPH
GVWVDATGAL YIADAHNYRV RKVAGGNIVT VAGTGTPGYS GDGGLAAAAD FRSVHGLVVD
GSGNLFVADM ENSRVRKVYE GFPAIPTTRT VCSAGCGYTS IQAAINASTD RDTVLVGPGT
YAENLNFGSK GVAAVSLEGA EGTIIDGNGS GTVVRFDSAG SYQARLAGFT VRNGRAASGG
GIRISGASPT IEDCIVTQNE AVSAGGGLYL ENGAAPILRN CVVTLNTAAY GGGIYSSGSS
PLIQSTTISL NTAGNGGGGV FVSAGSPTFM GGVIRENTAT LGGGGGAAFA NSARPVVQRF
HIDHNESASV GGGLHVYGGS DLLAANTVVS SNTSSSGGGG MHVDGATASV YSLTFAENTG
DPAAGVYSRN STVRIQNSIL WDTSAALGYE GTEPTVSTSD VRMSGGTYPG TGNANADPLF
KAGDAQCHLQ AGSPCVNAGG IADSPAIDTD LDIDGQIRSR LGTGGIDMGA DEVSSCTPVA
IAQDVTVEQD QSLAVTLEAT DTYGNALAYT VTQSPSHGAL SGAAPDLTYT PVTGYVGSDT
FRFRAGNDYA TSAPAVVAIT VKRHNNPPVA THGSLATDED TPASAHLAGT DPDSDDLTYS
IVVEPVNGTV VIDDAATGAY TYTPKRNGSG SDAFTFRVCD PFSCAVVPGI MEVTVRPVND
RPRISTIEPQ TISEDAHTGA LPFTVGDVET PAEALAVTGR SSNTALVRNA DIVFRGEGEN
RTVTVTPLPN RNGKVYITLT VNDGLLSAQR TFLLTVTPED DPPTITPIES ERTRENVPTP
PVAFQVDDID NPVETLKVSG RSSNTALVPD RNIVFGGSGA SRTVTLIPAP ERNGTTTITL
TVSDGALHAD TSFTLTVLPV NGRPIADAGP TQKVKEGAVV ILEGSNSIDP EREIVSYEWT
QVGGPPVTLR SGPEGRRANF TAPGGDPDGM SLLFRLTVKD EGGQSASDTC IVNVTRANRP
PVANAGQDRT VHAGDVVTLE GSALTEKGME IASYKWTQIS GPRVSLSPSP SGDKVSFAAP
EPDSVGVSLM FRLTVKDHRG LRSRDECIVN ITGRNHTPAA EAGGNRTVQS GAEVVLNGSG
SSDPDDGVAG YLWSQTEGPP VVLSDPTAAR PVFTAPRVSQ STRLVFRLIV TDHYGLRSRD
SCVVTVNPFD
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