Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2143 |
Symbol | |
ID | 4459532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2620502 |
End bp | 2621275 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639702909 |
Product | ABC transporter related |
Protein accession | YP_846260 |
Protein GI | 116749573 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTCC TGGAAGGCAA GGCCATATCC GTGAGCTTCG GTGGAGTTCA GGCGCTGAGC GCAGTCGACC TGTCGGTCCA CGAGGGCGAT GTGCTCGACC TGATCGGCCC CAACGGGGCG GGCAAGACGA CTCTGCTCAA CGCCATCTCC GGACTCTGTC CCGCCCGGTC GGAGACTTTG AAGTTCAACG GCACCGAGAT TTCGCGCCTG AAACCCCACC GAAGGGCAAA GCTCGGCATC GCCCGGACTT TCCAGGTGGT GAAGCCCTTC GACAGGCTGA CCGTAGTGGA AAACGTCGCC GTGGGCGCCA TGTTTTCAGG CCACAAAATT CCCACCAGGA GCCGGGTGAT CGAACGCGCG CGCGTCGCCC TCGAACAGGT GGGGATCGCG TCCAAGGCGG ACCTCTTTCC ACGGCAGCTC ACGCTGTCCG AACGGCAGCA GCTCGAACTG GCCCGGGCGC TTGCCATGGA ACCCGCGCTT CTTTTGCTCG ACGAGGTCAT GGCGGGCCTG AATCACGCGG AAATCGAGAA GACGATGGCC CTCATACAGC ACATCAACAA GAACCTGGGC ATAACGATCG TCGTGGTCGA ACACGTCATG AAGGCCATCA TGAATGTGTG CAATCGCATC GTGGTGCTCC ATTTCGGGAA GAAGATCGCC GAGGGCACCC CGGCCCGGAT CGTGGAATCC CCCGAGGTGA TCCAGGCCTA CCTCGGAAAG CGCTTTGCGG ATCGTCAGCG CAGGGACCAG GCGCAAAGGG CGGCACAACC ATGA
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Protein sequence | MTLLEGKAIS VSFGGVQALS AVDLSVHEGD VLDLIGPNGA GKTTLLNAIS GLCPARSETL KFNGTEISRL KPHRRAKLGI ARTFQVVKPF DRLTVVENVA VGAMFSGHKI PTRSRVIERA RVALEQVGIA SKADLFPRQL TLSERQQLEL ARALAMEPAL LLLDEVMAGL NHAEIEKTMA LIQHINKNLG ITIVVVEHVM KAIMNVCNRI VVLHFGKKIA EGTPARIVES PEVIQAYLGK RFADRQRRDQ AQRAAQP
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