Gene Sfum_2143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2143 
Symbol 
ID4459532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2620502 
End bp2621275 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content62% 
IMG OID639702909 
ProductABC transporter related 
Protein accessionYP_846260 
Protein GI116749573 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCC TGGAAGGCAA GGCCATATCC GTGAGCTTCG GTGGAGTTCA GGCGCTGAGC 
GCAGTCGACC TGTCGGTCCA CGAGGGCGAT GTGCTCGACC TGATCGGCCC CAACGGGGCG
GGCAAGACGA CTCTGCTCAA CGCCATCTCC GGACTCTGTC CCGCCCGGTC GGAGACTTTG
AAGTTCAACG GCACCGAGAT TTCGCGCCTG AAACCCCACC GAAGGGCAAA GCTCGGCATC
GCCCGGACTT TCCAGGTGGT GAAGCCCTTC GACAGGCTGA CCGTAGTGGA AAACGTCGCC
GTGGGCGCCA TGTTTTCAGG CCACAAAATT CCCACCAGGA GCCGGGTGAT CGAACGCGCG
CGCGTCGCCC TCGAACAGGT GGGGATCGCG TCCAAGGCGG ACCTCTTTCC ACGGCAGCTC
ACGCTGTCCG AACGGCAGCA GCTCGAACTG GCCCGGGCGC TTGCCATGGA ACCCGCGCTT
CTTTTGCTCG ACGAGGTCAT GGCGGGCCTG AATCACGCGG AAATCGAGAA GACGATGGCC
CTCATACAGC ACATCAACAA GAACCTGGGC ATAACGATCG TCGTGGTCGA ACACGTCATG
AAGGCCATCA TGAATGTGTG CAATCGCATC GTGGTGCTCC ATTTCGGGAA GAAGATCGCC
GAGGGCACCC CGGCCCGGAT CGTGGAATCC CCCGAGGTGA TCCAGGCCTA CCTCGGAAAG
CGCTTTGCGG ATCGTCAGCG CAGGGACCAG GCGCAAAGGG CGGCACAACC ATGA
 
Protein sequence
MTLLEGKAIS VSFGGVQALS AVDLSVHEGD VLDLIGPNGA GKTTLLNAIS GLCPARSETL 
KFNGTEISRL KPHRRAKLGI ARTFQVVKPF DRLTVVENVA VGAMFSGHKI PTRSRVIERA
RVALEQVGIA SKADLFPRQL TLSERQQLEL ARALAMEPAL LLLDEVMAGL NHAEIEKTMA
LIQHINKNLG ITIVVVEHVM KAIMNVCNRI VVLHFGKKIA EGTPARIVES PEVIQAYLGK
RFADRQRRDQ AQRAAQP