Gene Sfum_2129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2129 
Symbol 
ID4459553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2603479 
End bp2604258 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content66% 
IMG OID639702895 
Productprecorrin-4 C11-methyltransferase 
Protein accessionYP_846246 
Protein GI116749559 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2875] Precorrin-4 methylase 
TIGRFAM ID[TIGR01465] precorrin-4 C11-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000738255 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTCATC CCATTCATTT TGTCGGTGCG GGTCCCGGCG ATCCCGAGCT GATCACGGTC 
AAGGGCCGGC GACTGTTGCG CGAGGCCGGT TTGATCGTAT TCGCGGGATC GCTCGTGCCC
GAGCGCCTGT TGGAGGACCG GGCGGCGGAC GCGCAAATTT ACAACAGCGC GTCTCTGACC
CTGGCGGAAA CGCACGCGCT GCTGGTGCGG GGCTACCGGG AGGGCAAGCG CGTGGTGCGC
CTTCACACGG GGGATCCGAG CCTTTACGGG GCCATCCGGG AACAGATGGC GTTGCTCGAC
TCCGAAGGCA TCCCATACAA GGTGGTTCCG GGGGTGTCCG CGGTGTTTGC CGCCGCCGCC
GCGCTCAGGC AGGAACTGAC CGTGCCCGAA ATGTCCCAGA CGGTCATCCT CACGCGCATG
GCGGGAAGGA CCCCGGTGCC GGAGAGGGAG CGGCTGAGGT CCCTGGCATC GCACGGGGCG
ACACTCGTCA TCTACCTGAG CGTTCAGCAG ATCGAGAGCG TCATCGCCGA AGCGGCTTCC
GGCTATTCAC CGGAAACCCC CGTGGCGGTG GCCTACCGGG TGGGATGGCC GGATGAGCTC
CTGGTCGAAG GGACCCTGGC GGATATCGTC GCAAAGGTGA ACGAAGCCGG CATCAAGCGG
CAGGCGATCG TCATGATCGG CCGGGTGTTC GGCAGGGGCG GCCCGCGGGA TGCCAGGCAA
TCGAAACTCT ACGATGAGTC CTTCAGCCAT GGATTTCGAG AAGCCAAGCC GCGGTCCTGA
 
Protein sequence
MAHPIHFVGA GPGDPELITV KGRRLLREAG LIVFAGSLVP ERLLEDRAAD AQIYNSASLT 
LAETHALLVR GYREGKRVVR LHTGDPSLYG AIREQMALLD SEGIPYKVVP GVSAVFAAAA
ALRQELTVPE MSQTVILTRM AGRTPVPERE RLRSLASHGA TLVIYLSVQQ IESVIAEAAS
GYSPETPVAV AYRVGWPDEL LVEGTLADIV AKVNEAGIKR QAIVMIGRVF GRGGPRDARQ
SKLYDESFSH GFREAKPRS