Gene Sfum_2086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2086 
Symbol 
ID4459615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2552759 
End bp2553757 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content65% 
IMG OID639702853 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_846204 
Protein GI116749517 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.11707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.37357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCCG ATGAATTCTT CAGGCGTCTC GAACGGGAAC CTCTGTCGCC CGTCTATTTC 
CTGGTCGGGG AGGCGGAGCT GTTGATCGAG GAGGCCTGGA AACGGCTCGT GGAGAAGATC
GCCTCGGGCG GAGCCCGCGC GTTCAACGGG GAACGCTACC AGGCGAAGGA ATACACCGCC
GCGGAGATGG TGGCCGGGCT GCGCGCCCTT CCCATGTTTG CCCCGAAACG GCTGCTCATG
GTCCGCCACA TCGAAAACTG GCCCGAAGAA CAGCGCAAGA TCCTGCTTTC CTACCTCGCC
CGCCCATTCC CGACGGCATG CCTGGTGCTC ACGCTTTCCG GTAAAAAGGG GCTGGAGAAA
ATCGAAGCGG CGGTGACGGC GGTTGGAACC GTCGTCCACC TTCACGGCCC GTCGGAGAGG
GAACTGCCCC GCTGGCTGCG GGACCGGGCC CGGCAGCGGG GGAAGGAACT CTCCTTCCAG
GCCGCGATGC ACCTCGCGGA ACAAGTGGGA ACCGACCTGC AAAGACTTGA AAGTGAGCTC
GAGAAGCTCA TCACCTATGT GGGCGACAAC GCGGCCATCG AGGCCGACGA TGTCCTGCAG
GCAGTGAGCG CGCAACGCGG CCACACGATC TTCGAGCTGC TGGATGCCGT GGCGGAACGC
AAGAGCGGGC GGACCCTGGC GATGCTGCGG TCCCTGCTGG CGGAAGGTCA GGCGCCGCTG
CAGGTTCTGG CCATGATCGC GCGGCACGTC CGTCAGCTGT GGCAGGTGAA GAGCGCCCTG
GAAGAAGGGA TGCCGCTGCC GCAGGCGGCC CGCAAGTTCA ACATCCATCA GTTCGTGGCG
GGCAAGCATG CCCGGCAGGC GCCGCTTTTC AGCGAAGCCG ACCTGTACCG GATGCACCGT
GCCATCTGCG ACACGGACTT CGCCCTCAAA AGCACCGGGA CGAACCCGGA GGCACTGCTC
GAAAACCTGG CGCTGGGGAT GTGCCTGAAA AACGACTGA
 
Protein sequence
MPADEFFRRL EREPLSPVYF LVGEAELLIE EAWKRLVEKI ASGGARAFNG ERYQAKEYTA 
AEMVAGLRAL PMFAPKRLLM VRHIENWPEE QRKILLSYLA RPFPTACLVL TLSGKKGLEK
IEAAVTAVGT VVHLHGPSER ELPRWLRDRA RQRGKELSFQ AAMHLAEQVG TDLQRLESEL
EKLITYVGDN AAIEADDVLQ AVSAQRGHTI FELLDAVAER KSGRTLAMLR SLLAEGQAPL
QVLAMIARHV RQLWQVKSAL EEGMPLPQAA RKFNIHQFVA GKHARQAPLF SEADLYRMHR
AICDTDFALK STGTNPEALL ENLALGMCLK ND