Gene Sfum_2067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2067 
Symbol 
ID4459647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2529779 
End bp2530240 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content54% 
IMG OID639702834 
Productputative PTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_846185 
Protein GI116749498 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC TGGACATCCT TACACAGGAA TCGATCATCC CCGAGCTGAA GGGCAGAACC 
AAAAGGCAGG TGCTGGAAGA ACTCATCGAC GCTATGCTTC AACATAAGCC CCAGATGGAT
CGCGAACGCC TGATGGGGGT GCTCCTCGAT CGGGAGCGTC TGGGCAGCAC GGGAATCGGA
GACGGTATCG CGATTCCTCA TGGAAAGATA AAAGATCTGG ACCAGCTGAT TCTCTCCTTC
GGGAGATCGA CCCAGGGGGT CGATTTTGAA TCGATGGACG GAAAACCGGT GCATTTGTTT
TTCCTCCTGG TCGCCCCGGA ATCCTGCGCG GGGATTCACC TGAGGGCACT CGCCAAGATT
GCGAGGCTCC TGAAGAACAA TTCCGTGCGA AAACAGCTGG GGAACGTGAC CGGCAAGGAT
GAGATATTTG CGGTCATCCG GCAGGAGGAT GAGGATTTCT GA
 
Protein sequence
MKILDILTQE SIIPELKGRT KRQVLEELID AMLQHKPQMD RERLMGVLLD RERLGSTGIG 
DGIAIPHGKI KDLDQLILSF GRSTQGVDFE SMDGKPVHLF FLLVAPESCA GIHLRALAKI
ARLLKNNSVR KQLGNVTGKD EIFAVIRQED EDF