Gene Sfum_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2011 
Symbol 
ID4459677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2461070 
End bp2461573 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content64% 
IMG OID639702777 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_846129 
Protein GI116749442 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGCGATG CGGGGAGGGG GGTCGAGTTG AAGCTCAGGT TTGTCCTCAA CGGTGAGAGC 
GTTGAAATCG AGGTCCGTCC GGACCGCAGA GTGGTCGACC TGCTGCGGGA GGATTTCGGG
CTGACGGGAA CCAAGGAATG CTGCGGATCG GGAGAGTGCG GTGGGTGTAC CATCCTGGTC
GACGGTGATT GCCGGTTGTC GTGCCTGATG CTGGCGGCTC AGCTGCACGG CAGGGAGGTC
GTCACCATCG AGGGCCTGTC CCGCAATGAT CGGCTTCATG CCGTGCAGGA GGCCTTCATG
GAACACGGAG CCGTACAGTG CGGATTCTGC ACGCCGGGAA TGGTGCTCGC GGCCGTCAGC
CTGCTTGCCC GGCAGCCGCG TCCCAGCCGG GAGCAAATCC GGGAAGGGTT GAGCGGTAAC
ATCTGTCGGT GCACCGGTTA CGTCAAGATC GTGGATGCGG TGGAAGCGGC CGCCCTGAAA
CTCGCGAATG GGGACCGGCG ATGA
 
Protein sequence
MCDAGRGVEL KLRFVLNGES VEIEVRPDRR VVDLLREDFG LTGTKECCGS GECGGCTILV 
DGDCRLSCLM LAAQLHGREV VTIEGLSRND RLHAVQEAFM EHGAVQCGFC TPGMVLAAVS
LLARQPRPSR EQIREGLSGN ICRCTGYVKI VDAVEAAALK LANGDRR