Gene Sfum_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1984 
Symbol 
ID4459720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2427799 
End bp2428503 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content61% 
IMG OID639702750 
ProductexsB protein 
Protein accessionYP_846102 
Protein GI116749415 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGACAGG AACATCGTCG CAAAGCCGTG GTGCTCTTTT CAGGGGGCAT CGACTCCACC 
ACCTGCCTTG CCGTTGCCAA GGCGGAGGGA TTCGAGGCTT ACGCGTTGAG CTTCTTCTAC
CACCAGAGGC ACGGGGTGGA GGTGGAGGCC GCCCGGCGTT CGGCACCCGC CCTGGGGGCA
AGGGAACACC TCGTGCTGGA GCTGCCGCTG GATCGGATTG GAGGGTCCGC TCTGACCGGC
CATGAGGAAG TTCCCAAAGA CGTTCCCGTC GAAAAGATGT CGGACCGTAT TCCGGCAACC
TATGTGCCGG CCCGGAATAC CATCTTTCTG TCCTTTGCGC TGGCGTGGGC GGAGGTGCTC
GGCGCCGCGG ACATATTCAT CGGCGTCAAC GCGCTCGACT ATTCGGGGTA CCCCGACTGC
CGCCCGGAAT ACATTGCCGC CTTTGAAAGG ATGGCCAACC TGGCGATCCG GGAAACCGTG
GAAGGCAGAA TGCGCATCAA GGTCCATACC CCGCTCATTC GTCTGACCAA GGGGGAGATC
ATCAAGCGCG GTCTTGAGCT CGGCCTCGAC TACAGCCTGA CCCATTCCTG CTACGATCCC
GACGCCCGGG GACTGGCCTG CGGACACTGC GACAGTTGCA TTCTCAGAAA GAAAGGATTC
ATGGAAGCAG GAATACCGGA CCCGACGCGC TACGTTCGGG ATTGA
 
Protein sequence
MGQEHRRKAV VLFSGGIDST TCLAVAKAEG FEAYALSFFY HQRHGVEVEA ARRSAPALGA 
REHLVLELPL DRIGGSALTG HEEVPKDVPV EKMSDRIPAT YVPARNTIFL SFALAWAEVL
GAADIFIGVN ALDYSGYPDC RPEYIAAFER MANLAIRETV EGRMRIKVHT PLIRLTKGEI
IKRGLELGLD YSLTHSCYDP DARGLACGHC DSCILRKKGF MEAGIPDPTR YVRD