Gene Sfum_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1977 
Symbol 
ID4459713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2417474 
End bp2420539 
Gene Length3066 bp 
Protein Length1021 aa 
Translation table11 
GC content61% 
IMG OID639702743 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_846095 
Protein GI116749408 
COG category[C] Energy production and conversion 
COG ID[COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACA AGAATGAATT GAAGCCAGTC ACCGGCGCAG TGATGGTGGT GGGGGGCGGT 
ATTGCGGGCG TGCAATCGGC CCTCGATCTC GCGGATTCCG GCTTTTACGT CTACCTGGTG
GAGAAAAGCC CATCGATCGG CGGGGTTATG GCCCAGCTGG ACAAGACGTT CCCGACGAAC
GACTGTTCAA TGTGTATCCT CTCGCCCAAG CTCGTCGAAG CGGGTCGTCA TCTCAGTATT
CAACTGATCA CCAAGGCGGA AGTCGAAAAG GTGGAAGGGG AAGCCGGCGA TTTCACCGTG
ACGGTGAGGG AACAGCCGCG GTACGTGGAT TCGAGCAAAT GTATCGCCTG CGGCGTTTGT
GCCGAGAAAT GCCCCAAGAA GGTCGATGAC CTGTTCAACG AAGGGCTTGG AAAGCGTAAG
GCCGCGTACG TCAAGTACCC GCAGGCCGTG CCGCTCAAGT ATGTCATCGA TGAGGACAAC
TGCATCTATT TCAAGAGCGG GAAATGCCGG GCCTGCGAAA AGTTCTGCCC CGCCGGCGCC
GTCGATTTCT CCCAGAAGGC CAGGGACCAC GTCATCAAGG TCGGTTCGCT CATTCTGGCT
CCCGGCTTCC AGCCCTTCGA GCCCGCCGTG TACGATACTT ACGGGTTCGG CAAGTACCCC
AACGTGATCA CCAGCATGCA GTTTGAGCGT ATCCTGAGTG CTTCGGGCCC GTTTGAAGGA
CATCTGGTCC GGCCGTCCGA CGGGAAGGCG CCCCAAAAGA TCGCCTGGCT GCAGTGCGTG
GGCTCCCGCG ATATCCATCG GGGAGCGCAC GGTTACTGTT CGGGCGTCTG CTGCATGTAT
GCCATCAAGG AGGCCGTCAT CGCCAAGGAG CATGCCCACG GCGACCTGGA CACGGCCATA
TTTTTCATGG ACATGCGCAC CTACGGGAAG GAGTTCGAGC GCTATTACAA TCGGGCGAAG
ACGGAAACCG GAGTGCGCTT CATCAGGTCC AGGATTCACA GCATCGAGCC AGCCGGGGCC
GGGTCGCACG ATCTGAAGCT GGAGTATGTC GACGACGGCG GCGTGGCCCG GAGCGAAGAA
TTCGACATGG TGGTTTTGTC CGTCGGCCTG GAGGTCTCCA GGGACATCCG CGATCTCGCG
GCCAGGCTGG GCATCGAGCT CAATGAAGAC GGTTTCGCCG CGGCCAGCGA CTTTGCCCCC
GTGGAAACCT CCCGTCCCGG GATCTTCGTC AGCGGTGCGT TCTCGGGACC CAAGGACATC
CCTTACTCGG TCATGGAATC CTCCGCAGCA TCCGCCGCGT CGGCTGCCTT GCTTGCGGCT
TCCCGTAATT CGCTCACCAA GGAAAAGACC TATCCGGACG AAAATCCGGT CTCGGGAGAA
GAAACCCGGA TCGGCGTCTT CGTTTGCCAT TGCGGGATCA ATATCGGCAG CGTGGTCGAC
GTTCCCGCGG TCCGCGATTA CGCCAGGAGC CTGCCGCTCG TGGCTTATGT GGCGGACAAC
ATGTTCACCT GCAGCCAGGA CACGCAGAAA CTCATCCGCG ATGCCATCGT GGAACACAAA
CTGAACCGGA TCGTCGTGGC CGCCTGTACG CCGCGCACCC ATGAACCGCT CTTCCAGGAA
ACCATCCGGG AAGCCGGCAT GAACCGTTAT CTCTTCGAGC TGGCCAACAT CCGCGACCAG
GACTCCTGGG TCCACCAGGC GGAGCCCGAG AAGGCCACGC AAAAGGCCAA AGACCTGGTT
CGCATGGCCG TGGCCAAGGT GGCCCTGCTC GAGCCCATCG AGAAGTTGCG GGTGGAGCTG
AATCAGTCGG CCCTGGTGAT CGGCGGGGGC GTGGCGGGGA TGAGCGCGGC TCTGAACCTG
GCCGACCAGG GATTCAAAAC GTTCCTCGTG GAAGAAAAGA ACGAACTGGG CGGGCACGCC
CTGAAGGTCA GGAAAACCTG GCGCGGAGAG GAAGTCGGTC CCTTCGTGGC CCGGATGCGC
GACCGCGTTC TGAATCACGA AAACATCGAA GCGCTGGTCG GTGCCAGGAT CCTGGACGTC
CAGGGTTTCA TCGGGCAGTT CAACACCACC GTGCAGGTGG ACGGGAGCGA GCGGAACCTG
GAGCATGGCG TGACCGTCCT GGCCACGGGC GCTCACTCTC TCAAGCCCGA GGAATACCTC
TACGGTCGAA GCGAGCGCGT GACTCGGTGG CACGAGTTGC AGAAGCTCTT CGATGAGAAG
CCCGGGGAAC TGGAGCGGGC GGAGGCCGTG GCCTTCATTC AATGCGTGGG GTCTCGCGAG
CCCGAGCGGC CTTACTGTTC GAAGATCTGC TGCACGGCTT CCGTTCAGGA AGCCATCGAG
CTGAAGACTC TCAAACCCGA TCTGGACGTT TTCATCCTCT ATCGCGACCT GCGTACTTAC
GGGCAGCGGG AGGAACTCTA CCGGAAGGCA CGGGAGCAGG GTGTGCTCTT CATCCGGTAT
TCGGTCGACG AGAAACCCCT GGTTGAGACG ATCCCCGGCT CGGAGAAACT GCGGATTACC
GTGCGCGACC ACGTGCTCGG CAGGCCCGTG CAGATCGATG TGGACTACCT CAACCTGGCC
ACTGCCATCA TCCCCAAGGG CCAGGAAACG CTCGCCAAGT TCTTCAAGGT GCCCCTCAAC
GAGGACGGGT TTTTCCTCGA GGCGCACATG AAGCTGCGCC CCGTGGATTT TGCCACGGAC
GGCGTGTTCA TTGCCGGTCT GGCGCATTAT CCGAAACCGA TCGAAGAATC CATCGCCCAG
GCTCAGGCGG CCGCCGCGCG CGCGGCGAGC GTCCTGGCCA AGCCTTTCGT GGAAGTCGCC
CCCGTGGTTT CCGTAGTCGA CCAGGAAGCA TGCATCGGCT GCGGGTTGTG TGAAGCCTTG
TGCCCCTTTG GCGCCATTCG GCTCCACAAG GTGATCGGAA AGGGATTCCG CGCCGAAACG
ATTTCGGCTT CCTGCAAAGG CTGCGGAGTC TGCTCCGCGT CATGCCCCCA GAAGGCCATC
GACATGAAGC ACTTCCGCGA CCGGCAGATT GTGGCCGCCA TACGGGCGGG AGGTCAAAGA
GGATAA
 
Protein sequence
MKNKNELKPV TGAVMVVGGG IAGVQSALDL ADSGFYVYLV EKSPSIGGVM AQLDKTFPTN 
DCSMCILSPK LVEAGRHLSI QLITKAEVEK VEGEAGDFTV TVREQPRYVD SSKCIACGVC
AEKCPKKVDD LFNEGLGKRK AAYVKYPQAV PLKYVIDEDN CIYFKSGKCR ACEKFCPAGA
VDFSQKARDH VIKVGSLILA PGFQPFEPAV YDTYGFGKYP NVITSMQFER ILSASGPFEG
HLVRPSDGKA PQKIAWLQCV GSRDIHRGAH GYCSGVCCMY AIKEAVIAKE HAHGDLDTAI
FFMDMRTYGK EFERYYNRAK TETGVRFIRS RIHSIEPAGA GSHDLKLEYV DDGGVARSEE
FDMVVLSVGL EVSRDIRDLA ARLGIELNED GFAAASDFAP VETSRPGIFV SGAFSGPKDI
PYSVMESSAA SAASAALLAA SRNSLTKEKT YPDENPVSGE ETRIGVFVCH CGINIGSVVD
VPAVRDYARS LPLVAYVADN MFTCSQDTQK LIRDAIVEHK LNRIVVAACT PRTHEPLFQE
TIREAGMNRY LFELANIRDQ DSWVHQAEPE KATQKAKDLV RMAVAKVALL EPIEKLRVEL
NQSALVIGGG VAGMSAALNL ADQGFKTFLV EEKNELGGHA LKVRKTWRGE EVGPFVARMR
DRVLNHENIE ALVGARILDV QGFIGQFNTT VQVDGSERNL EHGVTVLATG AHSLKPEEYL
YGRSERVTRW HELQKLFDEK PGELERAEAV AFIQCVGSRE PERPYCSKIC CTASVQEAIE
LKTLKPDLDV FILYRDLRTY GQREELYRKA REQGVLFIRY SVDEKPLVET IPGSEKLRIT
VRDHVLGRPV QIDVDYLNLA TAIIPKGQET LAKFFKVPLN EDGFFLEAHM KLRPVDFATD
GVFIAGLAHY PKPIEESIAQ AQAAAARAAS VLAKPFVEVA PVVSVVDQEA CIGCGLCEAL
CPFGAIRLHK VIGKGFRAET ISASCKGCGV CSASCPQKAI DMKHFRDRQI VAAIRAGGQR
G