Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1961 |
Symbol | |
ID | 4459732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 2397970 |
End bp | 2398851 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639702729 |
Product | radical SAM domain-containing protein |
Protein accession | YP_846081 |
Protein GI | 116749394 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0251824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCATG ACGCCCCGAG GCACCAGCCG CACAGCCGGC ACCCATGTTT CGACGCGGCG GCCGGCCGGT TTTACGGTCG CATTCACCTG CCCGTGGCGC CGCGCTGCAA CATCCGATGC GGCTATTGCA ACCGGTCCTG CGACTGTGTC AACGAGAGCA GGCCGGGGGT GACGAGTGTT GTGCTCGAAC CCGAGGAAGC CGCATCCCGG CTGGAGAAGG CCCTGCGCGA GATGCCTTTC GTCTCGGTCG CGGGCATCGC CGGTCCGGGC GACCCTTTCT GCGAGCCTGA ACGAACCCTG AGAACGCTGG AGCTCATCCG GCGCAAACAC CCGGACCTGG AGCTCTGCCT GTCCTCCAAC GGTCTGAACG TCCGCGACTT CATCCCTGAT CTGTCCGGCC TGGAAGTCCA TTTCATGACC GTCACGATGA ACGCGGTGTC GCCCGACATC GGCGCCCAAA TATACACCGA CGTCCGGATC GGGCCCGACG TGCTGCAGGG CCGCGATGCG GCGGCGGCAC TTCTTGAAAG GCAGATGGAG ACCATTGCCG GGTTGAAGGC GAAACATCTT GCGGTCAAAG TCAACACGGT GCTCATCCCC GGAGTGAACG ACCGGCACGT GTGTGCCGTT GCGCAATGCG CGGCGAAGCT GGGAGCCGAT CTGATGAACC TGATCGGCAT CATCCCGCTC CCGGGCACGG CCCTGCAGGA TGTCATCCCT CCATCGGCGT CGCACCTCGC CCGGCTGCGG CGCACGGCCG CGGTCTTCCT GCCCCAGATG CACCATTGCC GACGGTGTCG CGCGGATGCC GCGGGGCTCC TGGCCGACGA CCGATCGTGC AGGCAGCTCC CTTCGACCCG GTGCTCCACC GCTTCCGCTT GA
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Protein sequence | MLHDAPRHQP HSRHPCFDAA AGRFYGRIHL PVAPRCNIRC GYCNRSCDCV NESRPGVTSV VLEPEEAASR LEKALREMPF VSVAGIAGPG DPFCEPERTL RTLELIRRKH PDLELCLSSN GLNVRDFIPD LSGLEVHFMT VTMNAVSPDI GAQIYTDVRI GPDVLQGRDA AAALLERQME TIAGLKAKHL AVKVNTVLIP GVNDRHVCAV AQCAAKLGAD LMNLIGIIPL PGTALQDVIP PSASHLARLR RTAAVFLPQM HHCRRCRADA AGLLADDRSC RQLPSTRCST ASA
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