Gene Sfum_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1960 
Symbol 
ID4459731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2397226 
End bp2397969 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content60% 
IMG OID639702728 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_846080 
Protein GI116749393 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.145227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTC CGGGTCTGAA AGCGTGGCGA AGACTCGGCC AACTGGCCAT GCTCGCGGTC 
GTCGGGCAGT GGTCCTTTTA CGGGATTTTC CGTTGTCCCT TCCTGGTTCC TTACATCAGT
TGCGAAACCT GCCCGGTGAT CACGTGCCAT GGGCGGATAC TGAGCCTCTT CTGGGGTTTC
TGGCTGCTCC TGCCGTTGTC CGTGGTTTTC TTTGGAAGGG CTTTCTGCGG GTGGGCATGC
CCCGGCGGAC TGGTCAATCA GCTGCTCGGC ACTTCGGCGC CGATTAAGTT GCGAGTGCGA
AACGTCCTCA CACGGTTTGC ACCTTTGGGC ATGGTCCTGG GCGTTGCCGT CGCGCTTTAC
GCGTATTTCG CGCTGGGCCA GCCCCGTGCT GCCGTTCCCA TCCGCGTGGG CGGTTTTTTC
GAATCCGCGG CCCTCACTTT CGAGCATGCC AACACGCTGT GGTTGGTCAG GACCTTTTTC
GTGCTCGGAT TCCTGGCCTT GGGACTGGCG CTCGCCAACG GCTGGTGTCG TTTCGCCTGC
CCCACGGGCG GCGTGCTGGA GATTCTCAAG AGATTCGCCT TGTTCAGGTT TTACAAGACG
AGCGACTGCA ACGAGTGCGA CAAATGCCTG CAGGTCTGCG AAATGGGAAC GCGCCCCGCT
GAAATGAACT GCAACAACTG CGGCGACTGT CTCGACGTTT GTCCGGCGGA CGCGATCCGT
TTCGGCAGGA AGAAGTCCGA CTAG
 
Protein sequence
MPRPGLKAWR RLGQLAMLAV VGQWSFYGIF RCPFLVPYIS CETCPVITCH GRILSLFWGF 
WLLLPLSVVF FGRAFCGWAC PGGLVNQLLG TSAPIKLRVR NVLTRFAPLG MVLGVAVALY
AYFALGQPRA AVPIRVGGFF ESAALTFEHA NTLWLVRTFF VLGFLALGLA LANGWCRFAC
PTGGVLEILK RFALFRFYKT SDCNECDKCL QVCEMGTRPA EMNCNNCGDC LDVCPADAIR
FGRKKSD