Gene Sfum_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1956 
Symbol 
ID4459727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2393204 
End bp2393695 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content57% 
IMG OID639702724 
ProductNADH dehydrogenase subunit E 
Protein accessionYP_846076 
Protein GI116749389 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.131976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCTG AAGAAATGAG AAGCGCTCTG GCGCGAAAAG CGGCGTCGGC GGAAAGTCCC 
CGGGAACAGG CCATCGATGT CATGTTCGAA TTGCAGGACC ACTACGGGTA CATGACCGAT
GAAGCCATGG AGGAGGCGGC CGGGATTCTC GGAATGACGA CCCTGGAGCT CGAAGAGCTG
GCCACCTTCT ATGACCATAT TTACCGCAGC CCCGTGGGCA GGTACGTCAT CCACGTCTGC
GACAGCGCCG TCTGCTGGAT GGAGGGGTAC CAAAGGATCA TCGATTACCT TTGCCAACGG
CTTAAGCTCA CCGTGGGCGG CACATCGCCC GACGGCCTCT TCACCCTGCT TCCCGTTTGC
TGCATCGGGT ATTGTGACAG GGCTCCCGCC ATGATGATCA ATCGGAATGT CTACGGTCGG
CTGACCCGCG AAAAGATCGA CAGGATACTC GACCGGCTGA TCGAGCACTC GCAATTTCAC
GAAATGGAAT AA
 
Protein sequence
MIPEEMRSAL ARKAASAESP REQAIDVMFE LQDHYGYMTD EAMEEAAGIL GMTTLELEEL 
ATFYDHIYRS PVGRYVIHVC DSAVCWMEGY QRIIDYLCQR LKLTVGGTSP DGLFTLLPVC
CIGYCDRAPA MMINRNVYGR LTREKIDRIL DRLIEHSQFH EME