| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1949 |
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| Symbol | |
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| ID | 4459754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2383164 |
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| End bp | 2384300 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639702717 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_846069 |
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| Protein GI | 116749382 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.154084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA TCGAGGCATG CTGCACTCAC GGGGAACTCT GGGAGATCAT TCTCTCTTCC
ATCAAGGAAG CGATCATCCT TTCGGACACG GCGGGACGCG TGCTGAGCGC AAGCCCCGCC
GTGGAAAGGA TTCTGGGGTA TAAGCCCCAT GAGCTCGAAG GCGAGGACCT CTCCCTTCTT
TTCACCTCCG AAGACGTTTC GTGCCTGTGT CCCAACATCC TTCACCTGGC CGTGAAGCAT
CGACGGTTCG ACGGGGAGCT CATGCTGGTT CGCAAGGACG GGTCGCGGTT CGTCTGTTCG
ATGTCGGTCG AGCGCCACGT CGACCCGGAA GAAGGGAAGG AGATTCTGCT GTTCTGTGTC
GAGGACGTGG AGAAGCGCAG GGAATTGGAG CGGACCGCCG CCGGAAGCCA TTACCAGGAC
CTGATCAAGA TCGCGAACGG GATCGCTCAC GAGATCAGGA ACCCCCTGGT CAGCCTGGGA
GGTTTTCTGA ACCGGATCTA CAAGACCCAC TCCGGGGATG ATGAACTGAT GAAATACCAT
GACATTTCCA TGAGAAGTCT CAGGCGCATC GAAAACCTGA TCGCCAAAGT CGAGCTCTTC
GCCAGGCTCC CCACGCCTCA ACTGGAGGAG ACCGTCATTC GGGATTTGAT CGAAGAACTG
GCAAAATCCT ACGAGGACGA GCTGAGAAAA CGCAAGATCG AGCTGCATCT GACAGTCGAC
GATGCAGTGC TTCTTGTCGA CCGGAACCTG ATCGCCAAGG CGCTTGCCAT TATCATCGAG
AACGCGATCC AGGTGTTGCC CGGAGGCGGG CGGATAGAAA TCCTGTCGAG GAGCATGTCC
GATCAATACG AGTTGAGCGT CATCGACAAC GGCCCGGGAA TATCCGCGGA CGATCTGCCC
TATGTTTTCA ATCCCTTTTT CAGTACCAGA CCGGACGGGG TGGGAATCGA CCTGGCAGTG
GTCCGGCGGG TTGCGGAAAC CCACGGCGGA TGCGTCGGGG TCATTTCGAG CCCGGGTGAG
GGGGCGACCT TCTATCTGAG GCTGCCCGTC GAGAGGCGTC GATCCATCCG CACGATGCGC
CTTTCCGAAG ACCACGGGGT CAAACCTACA CTTTTCACTT TTCACAAATC TCCATGA
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| Protein sequence | MKLIEACCTH GELWEIILSS IKEAIILSDT AGRVLSASPA VERILGYKPH ELEGEDLSLL
FTSEDVSCLC PNILHLAVKH RRFDGELMLV RKDGSRFVCS MSVERHVDPE EGKEILLFCV
EDVEKRRELE RTAAGSHYQD LIKIANGIAH EIRNPLVSLG GFLNRIYKTH SGDDELMKYH
DISMRSLRRI ENLIAKVELF ARLPTPQLEE TVIRDLIEEL AKSYEDELRK RKIELHLTVD
DAVLLVDRNL IAKALAIIIE NAIQVLPGGG RIEILSRSMS DQYELSVIDN GPGISADDLP
YVFNPFFSTR PDGVGIDLAV VRRVAETHGG CVGVISSPGE GATFYLRLPV ERRRSIRTMR
LSEDHGVKPT LFTFHKSP
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