Gene Sfum_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1943 
Symbol 
ID4459748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2372406 
End bp2372816 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content60% 
IMG OID639702711 
ProductNADH-ubiquinone/plastoquinone oxidoreductase, chain 3 
Protein accessionYP_846063 
Protein GI116749376 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.633551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.543594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCA TATCCCCCGA TGGATCGCTG TCGCCCTGGG AACCGGGCAT GTTCAGCCTG 
GCGGTCTACG CCGTGCTGGT GGCGGCTTTC GTGGCCGTCC AGTTGTTCGT CGCGTGGTGG
CTGGGAGAAC GAAAGCCCGG CGTCGAAAAG GCCCGGCCTT ACGAATGCGG TATCATTCCC
ACCGGGTCGG CGCGCCTGCG CTACCCCGTT CCATTTTACC TGGTGGCGAT CTTTTTCCTG
ATTTTCGATA TGGAAGGCGC CTACATCCTG ACCTGGGCCG TCGCCTTCGA GGAACTGGGC
TGGGCGGGAT GGCTGCAGAT GTCTTTTTTC ATCGGCTTGT TGCTGGTCGG GCTGGTGTAC
GTCTGGAAAA AGGGAGGGCT TGATTGGAGG CCGTCGTACG GGAAAAAATG A
 
Protein sequence
MQPISPDGSL SPWEPGMFSL AVYAVLVAAF VAVQLFVAWW LGERKPGVEK ARPYECGIIP 
TGSARLRYPV PFYLVAIFFL IFDMEGAYIL TWAVAFEELG WAGWLQMSFF IGLLLVGLVY
VWKKGGLDWR PSYGKK