| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1942 |
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| Symbol | |
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| ID | 4459747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2370046 |
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| End bp | 2372409 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639702710 |
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| Product | trifunctional NADH dehydrogenase I subunit B/C/D |
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| Protein accession | YP_846062 |
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| Protein GI | 116749375 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases
[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit
[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C
[TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.699659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC GTTTTCTGAG CGCGGCGGAC TTCGTGCTCA ACTGGTCGCG CAAATACAGC
CTTTGGCCGC TGTTTTTCGG GCTTTCCTGC TGTTTTGTCG AGGAGGCGAC AGCCTTCACG
CCGCGCTACG ACATGGCCCG GTTCGGCGCC GAGGTGTTGC GTCCTTCACC CAGGCAGGCC
GATCTCCTGA TCGTCTCCGG AACGGTGTTC AAGAAGATCG CTCCGGTCGT CCTGCGCCTT
TACGAACAGA TGGCGGAGCC CAAATGGGTG ATCTCCATGG GGTCCTGTTC CAACTGCGGG
GGCATGTACG ACGTTTACAG CGTGGTGCAG GGAATCGACC AGATTTTGCC CGTGGACGTT
TACATCCCCG GTTGTCCGCC AAGGCCCGAG GCGGTACTGC AGGGGCTCAC GCTTCTTCAG
AAGAAGATCG CCGCCGAGGA GCGGCCGGCC CGTTCGGTGC TGCATCTGCC GGGAGGTTCC
CAGGGGAGCA CTCGCCCCGT ATTGGTGGAT GGTGCGACCA AATCCCGCGA CCCGCGAGGT
CCCGGGATGG AAGGGACGGT CATCCGCGGA ACGGCCAACA CCCCCCCGGC CTTCACGGGA
AGCCGCTCCG ATCTCATGTG GACGCCGCCC GCGCGGCGCA TCGAATCGAG CGAAAGGGAA
AAGGAACTGG CCCGCGTGCT TAGCGAGCGC TTCGGCGATG CGGTCCGCGA AGAGCCATTC
ACCTCGGACA TGCCCACGTT CCACGTCGAG ACGAACCGCC TGAAGGATGT GTTGGGTTTT
CTCAAGAAGG AGGCTTCACC GAGGTTCCTT CGCCTGGATG ACCTCACGGC CGTCGACGAG
TCCGCCCGAC GCGACCGGAG CGCTTATCCC GACTGGACGA TGGTCTATCA CCTCCTTTCC
TTCGAGCCCG CGGGGAGAGT GCGCCTCAAG ACGGGTCTCC ACGGCCGGCA GCCGGCCTTG
CCGAGCATTA CGGACATCTG GCCGTCCGCG AACTGGTACG AACGGGAAGT GTACGATCTT
TTCGGGATTC GTTTCGAGGG GCATCCGAAC CTGCGCCGGA TCATGATGCC CCACGACTGG
GAAGGGCATC CCCTGAGAAA GGACTATCCC GGACGGGCCA CGCAGATGGC TCCGTATACC
CTGGGCGATG CCCGGGTTCA TCAGCCTCCG GACGGAGGAA TATTCACAAA AGACCCCGGA
GGGGACCGGC TCGTGCTCAA CATCGGTCCC AGCCATGTCA GCACACACGG CTTGCTGCGC
TACGTCGTGT CGCTCGACGG GGAGGAAATT TCCGATCTCG AGCTGGAGAT CGGCTACCAT
CATCGCGGCG TGGAGAAGAT CGGAGAGCGC CAGACCTGGC ACCAGTTCAT CCCTTACTGC
GCGCGGGTGG ACTACCTGGC CGGGGCCGCC AACGATCTCC CCTACGTGAT GGCCGTGGAA
ACGCTTGCGG ACATCAAGGT TCCCGAACGC GCCCAGGTCA TCCGGGTGCT GCTCAGCGAG
CTGTTCCGGT TGAGCAATCA CTTGGTCTGG TTCGCCACCT ATGCCCATGA CGTCGGCGCC
ATGACCCCCA ATTTCTATAC GTTCACCGAA CGGGAGATGA TTCTCGACAT CGTTGAGCTC
ATCACCGGGG GGAGGCTCCA TCCTTCCTGG TTCCGGCTTG GGGGCGTCGC GGCGGACCTG
CCGGAGGGTT GGAAGGAAGC CGTGGACGCT CTGGTGAGGA TCTTTCCGGG CCGCCTCCGG
GAATACGAGA GCCTCATCCG GAAAAACCCC ATCTTCAAGG CCAGGACGCA GGGCGTGGGG
CGGATTTCCC GCGAGGATGC CGTGGACTGG GGGGTGAGCG GGCCGAACCT GAGGGCCTGC
GGTCTCGAGT GGGATCTTCG CAGGAAGTTC CCCTATTCGG GTTATGAGAA TTTCGAGTTC
GAGGTTCCCA CGGCGGTCGA AGGAGACTGC TATGCGCGCT ACCTGGTGCG GGTCGAGGAG
ATGCGCCAGA GCCTGAGGAT CATCGAGCAG GCGGCGGCGA ACATGCCTTC CGGTCGTCAT
GTGACGGACG ATTACCGTTA CGTGATTCCC GACCGCCGGG ATACGTTGAA GAACATCGAA
AGCCTGATCC ATCATTTCGT CAACGTCACC CGCGGGCCGA GAATCCCGAA GGGTGAAGCC
TATGTGTCCT GCGAGATTCC GCGGGGCGAG CAGGGGTACT ACGTGGTCGG CGACGGCCTC
GGATACGCGT ACCGCATGCG GATTCGAGGG CCGGGGTTCG CAAACGTCCA GGTGATGCCG
CTCCTGGCCA GGGGGGAAAG CATCGCGGAC CTCATCGCGA TCATCGGGTC GGTCGACTAC
ATCCTGCCCG ACATCGATCG GTGA
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| Protein sequence | MSDRFLSAAD FVLNWSRKYS LWPLFFGLSC CFVEEATAFT PRYDMARFGA EVLRPSPRQA
DLLIVSGTVF KKIAPVVLRL YEQMAEPKWV ISMGSCSNCG GMYDVYSVVQ GIDQILPVDV
YIPGCPPRPE AVLQGLTLLQ KKIAAEERPA RSVLHLPGGS QGSTRPVLVD GATKSRDPRG
PGMEGTVIRG TANTPPAFTG SRSDLMWTPP ARRIESSERE KELARVLSER FGDAVREEPF
TSDMPTFHVE TNRLKDVLGF LKKEASPRFL RLDDLTAVDE SARRDRSAYP DWTMVYHLLS
FEPAGRVRLK TGLHGRQPAL PSITDIWPSA NWYEREVYDL FGIRFEGHPN LRRIMMPHDW
EGHPLRKDYP GRATQMAPYT LGDARVHQPP DGGIFTKDPG GDRLVLNIGP SHVSTHGLLR
YVVSLDGEEI SDLELEIGYH HRGVEKIGER QTWHQFIPYC ARVDYLAGAA NDLPYVMAVE
TLADIKVPER AQVIRVLLSE LFRLSNHLVW FATYAHDVGA MTPNFYTFTE REMILDIVEL
ITGGRLHPSW FRLGGVAADL PEGWKEAVDA LVRIFPGRLR EYESLIRKNP IFKARTQGVG
RISREDAVDW GVSGPNLRAC GLEWDLRRKF PYSGYENFEF EVPTAVEGDC YARYLVRVEE
MRQSLRIIEQ AAANMPSGRH VTDDYRYVIP DRRDTLKNIE SLIHHFVNVT RGPRIPKGEA
YVSCEIPRGE QGYYVVGDGL GYAYRMRIRG PGFANVQVMP LLARGESIAD LIAIIGSVDY
ILPDIDR
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