Gene Sfum_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1852 
Symbol 
ID4459828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2261624 
End bp2262562 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content62% 
IMG OID639702619 
ProductThiJ/PfpI domain-containing protein 
Protein accessionYP_845972 
Protein GI116749285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAT CGATCCTGAT CGTACTTTCG GAATGGGGTT TTTGGGGGGA GGAACTTGTG 
GGGCCTTTGG AACAGTTCGA CAGGGCGGGC TACCGATCCG TGTTCTGCAC GCCGACGGGC
AGACGCGCCC ATGCTCTGCC TCCCAGCATG GATCCCGAGT TCGAGGATCC GCCTCTCGGC
AAGAGCGTGA CATCCCGTGA GACGGCCGAA AAGGTCAAGG CTGTCGAAGA CGCTTCGAAC
CCGCGTCTGG ACAACCCGAG GAACCTGTCG GCGATATTTC CGGAACGCCC CTACTGGAGC
GACAGGGAAG AAATCCGGTA CATGGACGAA AGCGGCGAGC TCGAGACCGT GAAGTCGCCG
CTACGGAAGT GGGAACGCTA TTATTCGTTG CGCGCCAAGG CCCAGCGGGA AACGGCGGAC
GAGTTCGACG CGCTGCTGAT CGTCGGGGGC AGCGGTCCGA TGATCGATCT TGTGAACAAC
TACCGCGTCC ACGACCTCAT CCTTGGATTC CTGGAGCAGG ACAAGCCGAT CGCGGCCGAG
TGCTACGGGG TCGCCTGCCT TGCCCAGGCC CGCAATTTCG ACGACAGCAG GAGCATCATC
TGGGGAAAGC ATGTGACCGG CCACGCCAAG GAATACGACT ACAAGGACAA TACAGGGGTG
CTCGATCCGG AAACGGGGCG GATCCTGACC CGGGCTTCGG GCAACTGGGT GAACCTCGGC
CCGCCCTTCT ACACCCTGGA GTATATGCTG CGCGACGCCG TCGGCCCCGA CGGGCAGTTT
CATCCCAACG TCGGCCGCGA GACATCGGTC ATCGTCGACT ATCCGTTCAT CACCGGACGC
TCCACCCCGG ACTCGGTCCT GACCGGCGAG ATGATCGTGA AGCTCCTGGA AACAGGCGGT
CCACGCCGGT GGGGCTGGGC CACCGCCAGG CAGTCGTGA
 
Protein sequence
MSKSILIVLS EWGFWGEELV GPLEQFDRAG YRSVFCTPTG RRAHALPPSM DPEFEDPPLG 
KSVTSRETAE KVKAVEDASN PRLDNPRNLS AIFPERPYWS DREEIRYMDE SGELETVKSP
LRKWERYYSL RAKAQRETAD EFDALLIVGG SGPMIDLVNN YRVHDLILGF LEQDKPIAAE
CYGVACLAQA RNFDDSRSII WGKHVTGHAK EYDYKDNTGV LDPETGRILT RASGNWVNLG
PPFYTLEYML RDAVGPDGQF HPNVGRETSV IVDYPFITGR STPDSVLTGE MIVKLLETGG
PRRWGWATAR QS