| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1846 |
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| Symbol | |
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| ID | 4459857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2253336 |
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| End bp | 2255054 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639702613 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_845966 |
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| Protein GI | 116749279 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.997362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATC ATGCACCGAT CATATTCACG GAAAGGACGG AGTGCCAGGA CTGCTTCAAG
TGCATCCGGG AATGCCCCGT CAAGGCGATC AAGGTGGAAA ACGCCTGTGC GGCCGTCATC
CCTCAGCTGT GCGTGCTGTG CGGCCATTGC GTGGAGGTCT GTCCCAACGG GGCAAAACAC
GTTCGGGACG ATCTCGAACA GGCTCGGCAG CTTCTCAAGG AGAAGGACCA GGTGTTTGCG
TCCCTGGCCC CGTCATTTGT GAGCGAGTTT CCGGACATCC CGCCTTCGGC GATCATCCGG
GCCTTGAAGA AGCTGGGGTT CGCCGGGGTT TCAGAAACCG CCCTGGGAGC CGAACGGGTT
TCGGGCAGCG TTGCCGGGCA ACTTCGGGAC AAGACGCCGC GAGTGATCAT CTCGACGGCT
TGCCCGGTGG TGGTGAACTA CCTGGGCAGG TACCACCCCC AGTATGCCGA ATGCCTGTCT
CCCTACGTGT CACCCGTACT GGCCCACTGT GAGCTGCTGC GCGAAACCTA CGGGCCGTCC
ATCGGCATCG TGTTTTTCAG CCCGTGCATC GCCAAGAAAG GGGAGGCCGA CAACAATTCC
CAGCTGCTCG ACATCGCCTT GACCTTCGAG GACATGCGGC ACTGGCTGCA GCTCGAACAA
ATCGCTTTCC AGCCGGGTCG CGGCGACGAG GAATCCTTTG TGCCGTATTC GGCCCAGGAA
GGAGCGCTTT ATCCCATCGA CGGAGGGATG GTGGCGGGGG TAAAAGCCGG CTGCAGCGTG
ATGGAGGCCG AATGCATGTC TTTTTCGGGA ATCCGCAACA TCCAGAAGGC CATGGCCGAT
CTGAGCGACA TGCGGCTCAC TCATCCCATC TTCCTCGAGC TCCTGGCCTG CGAAGGCGGT
TGCGTCAACG GCCCCAAGGC AAACCGGCGC AAAGGGACCA TCCTGAAGCG CTCCCAGATC
ATCCAGTACG CCAGGTATCC CCAGGAGGAA ATCCCACGGC CGCCCACTGC CCCTGTGTGG
GGGGACGCAC TGTATCCCGA TCCGGTGCCC AGGCCCGAGT ACAGCGACAA GATCCTGCGG
CAGACCCTGC AGGCTGTCGG CAAGTACGGC CCGGAAGACG AGCTCAACTG CGGCGGCTGC
GGCTACGACA ATTGCCGGGA GTTCGCCCGG GCGCTGATCG ACTGCAAGGC TGAGAAGGTC
ATGTGCGTCG CCTACATGCG CAAACTGGCC CAGAAAAAAA CCAATGCCCT CATGGAGAAG
ACGCCGAGCG CCATCGTCCT CGTGGACGAG GAGCTCAAGA TCATCGAATC CAATTACAAC
TTCGCGAAAA TCATCGGCCC GGATGCCGAA AACCTCTACG ATGAGCAGCC AGGGCTCGAA
GGGATCTTCC TCCACGAGAT CGCCCCGTTC TACTCACTTT TCAAAACCGT TCTCGAAAAG
GGCGAGGACA TCCTGAACCG CGATCTGCGC TACAAGAAAT CGGTCCTGCA CATCGATATC
TTCTCCATCG AGCAGTACCG GGTGGTTTGC GGCATCTTCC AGGACATCAC CAGCCCCACC
ATGCACAAGG AAGCCATGAT TCAGAAAGCC CAGGACGTCA TCAAGAAGAA CCTCGCCACC
GTCCAGCAGA TCGCTTACCT GCTGGGTGAA AACGCGGCGG AATCCGAAGT GATCCTCAAT
TCCATCATCC ATTCCATGAC ATCGCCGGAG CTGGAATGA
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| Protein sequence | MNNHAPIIFT ERTECQDCFK CIRECPVKAI KVENACAAVI PQLCVLCGHC VEVCPNGAKH
VRDDLEQARQ LLKEKDQVFA SLAPSFVSEF PDIPPSAIIR ALKKLGFAGV SETALGAERV
SGSVAGQLRD KTPRVIISTA CPVVVNYLGR YHPQYAECLS PYVSPVLAHC ELLRETYGPS
IGIVFFSPCI AKKGEADNNS QLLDIALTFE DMRHWLQLEQ IAFQPGRGDE ESFVPYSAQE
GALYPIDGGM VAGVKAGCSV MEAECMSFSG IRNIQKAMAD LSDMRLTHPI FLELLACEGG
CVNGPKANRR KGTILKRSQI IQYARYPQEE IPRPPTAPVW GDALYPDPVP RPEYSDKILR
QTLQAVGKYG PEDELNCGGC GYDNCREFAR ALIDCKAEKV MCVAYMRKLA QKKTNALMEK
TPSAIVLVDE ELKIIESNYN FAKIIGPDAE NLYDEQPGLE GIFLHEIAPF YSLFKTVLEK
GEDILNRDLR YKKSVLHIDI FSIEQYRVVC GIFQDITSPT MHKEAMIQKA QDVIKKNLAT
VQQIAYLLGE NAAESEVILN SIIHSMTSPE LE
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