Gene Sfum_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1804 
Symbol 
ID4459882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2200322 
End bp2203351 
Gene Length3030 bp 
Protein Length1009 aa 
Translation table11 
GC content61% 
IMG OID639702571 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_845924 
Protein GI116749237 
COG category[C] Energy production and conversion 
COG ID[COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.769121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCAAG CACAGAAGAT TGGCGCAATC ACTGTCGTCG GGGGAGGAAT TGCCGGTATC 
CAGAGCGCTC TGGACATCGC CAATTCCGGC TTCAAAGTTT ACCTTGTGGA GGAACAGCCG
AGTGTGGGCG GCATCATGGC CCAGCTCGAC AAGACTTTCC CCACCAACGA TTGCTCCTCG
TGTATGATGG GGCCCAAGCT GGTGGAACTG GCCAATCATT CCAACATAGA AATCCTGGCC
TATTCCGAGC TTCTTGACGT CACGGGGGAA CCCGGGAATT TCAAGGCGAC CGTCAGGCGG
AAGGCTCGCG CCGTGGATCC GGAAAAGTGC GTGGGGTGCG GTATTTGTGC GTCGAAATGC
CCGACGAAGG TGCCCGATCC ATTCAACGGC GAGATGAGCG AGCGCAGGGC GATCTATGTA
CCTTTCCCGC AGGCAGTGCC TCTGGTCTAT ACCATCGACA AGAGTGTCTG TCGGTATTTC
ACCAAGGGGA AGTGCCGGAT TTGCGAGAAG GTGTGCAAGA ACAAGGCGAT CGACTACGAT
CAGAAGGATC AGATCGTTGA GCTGGACACC GGCGCGGTCA TCCTCACCGG CGGCTTTCGG
CCCTTCGACG CGAGGCTGAA GCCGGAATAC GGTTACGGGC TGTGGCCCAA CGTGGTGACC
AGCCTCGATT ACGAGCGGAT CCTGTCCGCG GCCGGCCCTT TCCAGGGGCA CATTCAACGC
CTCTCGGACG GCAAGACGCC GGAGCGCATC GCCTGGATCC AGTGTGTGGG TTCCCGCGAC
AGCAGCATCG GCCGGGACTA TTGTTCCTCG GTCTGCTGCA TGTACGCCAC CAAGCAGGCG
ATGATCACCA AGGAACACGA ACACGACGCA CAGACAACCA TTTTCTACAT CGACATGCGC
GCGCAGGGCA AAGGGTTCGA CCGCTTCTTC GAGCGGGCGC GCGACGAGAC CGGGGTGCGC
TATGTGCGTT CGATGATTTC GCGCGTGCTG CCGGTGCCCG AGACCGACCG GCTGCAGATC
AGCTATGTGG ATGAAGCGCA GAAGCTTCAG CAGGAGGAGT TCGACATGGT CGTCCTCTCC
GTCGGGTTGT GCGCTCATCC ATCCACCATG GACTTAGCGA AACGACTCGG GGTCGAGGTC
GATCCCTTCG GCTTCTGCAA GTCCGATGCG ATGGATCTTG TGGCCACCTC CAGGCCGGGG
ATCTTCGTGA GCGGTGTGTT CCAGGGACCC AAGGACATCC CCGATTCCGT CCAGCAGGGA
AGCAGCGCGG CGGCCTGTGC GACTGCTCTG CTCGCCGATG CGCGCGGCTC CCTCATTGTG
ACACCTCCGA AAGTCGAGGA AAAAGACATC AAGGGACAGA AACCGCGAAT CGGCGTTTTC
ATCTGCCATT GCGGCATCAA CATCGCGGGG GTGGTGAACG TCGAGGAGGT GGCGGCCTAC
GCAAAGACGC TGCCGGGAGT GGAGTACGCG AGCAACTGCA TGTTTGCGTG TTCCACGGAT
CAGCAGAAGG AAATCAAGCG GGTCATCGAC GAACAGCAGT TGAACCGGAT CGTGGTGGCT
TCCTGCACTC CGCGGACGCA TGAGCCGCTG TTCCGGAACA CCATGCGTGA AGCCGGTTTG
AACCCGTATC TTTTCGAATT GGCCAACATC CGCGAACAGG ATGCCTGGGT GCACCAGGGA
GAAGCGGGCG CCGCAACGGA AAAGGCGAAG GACCTCGTGC GCATGGCGGT ATCGCGCAGC
ACGCTGCTTG AGCCGCTGCA CGACTTCTCC TACCAGGTGG TGCAGTCTGC GCTGGTGATC
GGAGGCGGGC TGGCGGGCAT GACGGCGGCT CTCGCCGTTG CCGACCAGGG TTTTCCGGCC
GTTCTGGTGG AATCGGCCGA GGAACTGGGG GGGAATGCTC GGACCCTCTA CTATACCGAG
GATGGCGCAA GCCCGGCCGA ATATGTTCAG GAACTGATCA AGAAGGTGGA GAGCAACGCT
CTGATCACGG TCCGCAAAGG GGCGGAAGTG GTGTCCCTGA TGGGAAGCTG CGGCAACTTC
ACGACCACCA TCCGCTATCA CGGTCAAACG GAGGAAATTC CCCACGGTGT CGGCATCGTC
GCCGTCGGCG GAGAGGAATA CAAGCCCGAA GAGTATCTCT GTGGTCAGGA CCCGCGGGTG
ATGACGCAGA AGGAATTCGA ATCGCTGCTG GCGAAGGAGC CGGAGAAGGC GAAGCAGTTC
GGGCGGGTCG CCATGATCCA GTGCGTGGGC TCGCGGGAAC CGGAGAATTC TTACTGCAGC
AGGGTATGCT GCACGTCGGC GGTGAAGAAC GGCATCAAGT TGAAGGAGCT CAATCCGAAA
GCGCAGGTTT CGATTCTCTA TCGCGACATC AGGACATTCG CCTTGAAGGA GCTTGCCTAC
CAGGAGGCGA GGCGGCGGGG CGTGCGCTTC ATGCGCTTCG ACGCCGATCG GAAGCCCGAG
GTGAAGGCGA ACGGGGCGGG GCTGCAGATT GCGCTTCACG ACGGCCAACT GGGACGCCCG
ATCAGCCTCG AGGCCGATCT GCTCGTTCTG AGCGCCGCAA TCCGGCCGCG CGCGGACAGC
AAGAAGCTGG CGGAAACGCT GCGCATGCCC CTGGACCAGG ACGGGTTTTT TTCGGAAGCG
CATATCAAGC TGAGGCCGCT TGATTTTGCG ACCGCCGGGT TCTTCCTGTG CGGGTTGGCC
CAGGGACCGA AGTTCGCCAA TGAGGCGATC GCCCAGGCGC GCGGAGCGGT GTCCCGGGCC
TGCACGATTC TGTCGCAAAA GGAGATCGTT GCTGAAGGTG TGGTGACCCA GGTGGATGCC
GCTCTTTGCC GAGCCTGCGG CGAATGCGAG AACACCTGTC TGTTCGAGGC GATCAAGGTC
AAGCAGATGG AGGATGGTCG GAAGCGGGCG ATGGTGAATG AAGCGCTGTG TACGGGATGC
GGGGCCTGCA ACGCGGCATG CCCCACGGGA GCGGCTTCGT TGGCCCATTT CCGGGACAAA
CAAGTCAACG CGGTGATCCA GGCACTATGA
 
Protein sequence
MRQAQKIGAI TVVGGGIAGI QSALDIANSG FKVYLVEEQP SVGGIMAQLD KTFPTNDCSS 
CMMGPKLVEL ANHSNIEILA YSELLDVTGE PGNFKATVRR KARAVDPEKC VGCGICASKC
PTKVPDPFNG EMSERRAIYV PFPQAVPLVY TIDKSVCRYF TKGKCRICEK VCKNKAIDYD
QKDQIVELDT GAVILTGGFR PFDARLKPEY GYGLWPNVVT SLDYERILSA AGPFQGHIQR
LSDGKTPERI AWIQCVGSRD SSIGRDYCSS VCCMYATKQA MITKEHEHDA QTTIFYIDMR
AQGKGFDRFF ERARDETGVR YVRSMISRVL PVPETDRLQI SYVDEAQKLQ QEEFDMVVLS
VGLCAHPSTM DLAKRLGVEV DPFGFCKSDA MDLVATSRPG IFVSGVFQGP KDIPDSVQQG
SSAAACATAL LADARGSLIV TPPKVEEKDI KGQKPRIGVF ICHCGINIAG VVNVEEVAAY
AKTLPGVEYA SNCMFACSTD QQKEIKRVID EQQLNRIVVA SCTPRTHEPL FRNTMREAGL
NPYLFELANI REQDAWVHQG EAGAATEKAK DLVRMAVSRS TLLEPLHDFS YQVVQSALVI
GGGLAGMTAA LAVADQGFPA VLVESAEELG GNARTLYYTE DGASPAEYVQ ELIKKVESNA
LITVRKGAEV VSLMGSCGNF TTTIRYHGQT EEIPHGVGIV AVGGEEYKPE EYLCGQDPRV
MTQKEFESLL AKEPEKAKQF GRVAMIQCVG SREPENSYCS RVCCTSAVKN GIKLKELNPK
AQVSILYRDI RTFALKELAY QEARRRGVRF MRFDADRKPE VKANGAGLQI ALHDGQLGRP
ISLEADLLVL SAAIRPRADS KKLAETLRMP LDQDGFFSEA HIKLRPLDFA TAGFFLCGLA
QGPKFANEAI AQARGAVSRA CTILSQKEIV AEGVVTQVDA ALCRACGECE NTCLFEAIKV
KQMEDGRKRA MVNEALCTGC GACNAACPTG AASLAHFRDK QVNAVIQAL