Gene Sfum_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1793 
Symbol 
ID4459905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2188876 
End bp2189220 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content57% 
IMG OID639702562 
Productmethyl-viologen-reducing hydrogenase, delta subunit 
Protein accessionYP_845915 
Protein GI116749228 
COG category[C] Energy production and conversion 
COG ID[COG1908] Coenzyme F420-reducing hydrogenase, delta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.944587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATATC CTCCGCATTT GCGGATCATC CGGGTCATGT GCTCCGGCAT GGTGAACCCT 
GAGCTCGTGG TGCACGCCCT GACCCAGGGA GCGGACGGCG TCATTATCAT GGGATGTCAC
CTGGGCGAGT GCCATTATCT CGAGGGCAAT TTCAAGACGG ACGCGCGTTT CGAGGGCACG
AGAGTGGTTC TCGAAAATTG CGGAGTCGAT GCCGAGCGTT TCGAGACCGT GTGGGTGTCG
TCCGCCGAGG CGCCTAAATT TGCGGAGAAC GTGGTCAGAT TTTCCGAGAA AATCAGGAAA
ATGGGCCCGA ACCCTCTGCG TGTCCAGAAG GTGGTCAACG CCTAA
 
Protein sequence
MQYPPHLRII RVMCSGMVNP ELVVHALTQG ADGVIIMGCH LGECHYLEGN FKTDARFEGT 
RVVLENCGVD AERFETVWVS SAEAPKFAEN VVRFSEKIRK MGPNPLRVQK VVNA