Gene Sfum_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1773 
Symbol 
ID4459920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2168101 
End bp2168898 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content63% 
IMG OID639702542 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_845895 
Protein GI116749208 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.908281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATT TCTTGAGCAC CATCCTGGAA GAGAAGAAAC GCGAAGTGGA GCAGCGAAAA 
AGGACGATTT CGGAGGAGTT CCTCGAGGAG CGTTCCGCCT CGGCCATGGA GCGGAGAAGC
CTGTGCCGGG CTCTGGCTAC CCCTGGACGC CGGGGGATCA ACATCATCGC CGAGGTCAAA
CGTGGTTCGC CTTCGCGCGG GGTCATGAAT CCCGGACTCG ATGCGGCACA GTTCGCAAGA
CGTTACGAGA GCTGCGGGGC GGCCGCCGTT TCGGTTCTGA CCGATGCCGG TTTCTTCCAC
GGCAAGGCCG GCGACCTGAG GAGCGCCAGG GCGGCCGTGA AGATTCCCGT GTTGCGGAAA
GACTTCATCG TTTCCAGGTA CCAGATTTTC GAGTCCGCCG TGATGGGCGC GGACGCCGTG
CTGTTGATCG TCCGGGCCAT TTCACCGGAA CTGCTCGGAG AATGCCTCCG TCTATGCCGC
CGGATCGGGC TCGACGCCCT TGTGGAGGTT CATTCGGCGG AAGAGCTGGA TGCGGCATCG
GAGGCCGGGG CGGTTCTCAT CGGCATGAAC AACCGGGACC TGAGCACTTT TACAACGGAC
ATCCGGACCT CGATACAACT GGTCCGCCGA ATGCGCCCGG GGCAGGTTGC CGTGTCGGAA
AGCGGCATTC GGTGCCGCGA GCAGATCGAC CGGCTGCTCG ACGCCGGGAT TTGGAACTTC
CTGATCGGGG AAAGCCTGGT GACCGCGCCG GAACCTGAAG CGGTCCTGGC CCATCTGTTC
GGAGCCTACG CGGCTTGA
 
Protein sequence
MSDFLSTILE EKKREVEQRK RTISEEFLEE RSASAMERRS LCRALATPGR RGINIIAEVK 
RGSPSRGVMN PGLDAAQFAR RYESCGAAAV SVLTDAGFFH GKAGDLRSAR AAVKIPVLRK
DFIVSRYQIF ESAVMGADAV LLIVRAISPE LLGECLRLCR RIGLDALVEV HSAEELDAAS
EAGAVLIGMN NRDLSTFTTD IRTSIQLVRR MRPGQVAVSE SGIRCREQID RLLDAGIWNF
LIGESLVTAP EPEAVLAHLF GAYAA