Gene Sfum_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1772 
Symbol 
ID4459919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2167303 
End bp2168046 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content63% 
IMG OID639702541 
Productphosphoribosylanthranilate isomerase 
Protein accessionYP_845894 
Protein GI116749207 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT CAATGAAGCC ACCCGGCAAC GGATTCGAAG GGAACCGATT ATCGTCCGTT 
GCGGAGCGGC GGGCGAAGGG CCGCGAACTG TCGGTGCCGG CAGTGAAGGT GTGCGGTCTC
ACCAGGGTGG AGGAAGCCCT CGGATGTGCC GCCTTGGGCG TGAGCGCCAT AGGACTGGTG
TTCTTTCCGA AGAGCCCGCG CTACGTGTCG GATGAGCAGG CGAGGGTCAT CGGTTCGAGC
CTGCCGCGCG GCGTTTGTGC CGTCGGTGTG TTCGTGAACG AAGACTACCG CACGATCATG
AAAAAGGTGG AGCTCTGCGG ACTGGGTGCG GTGCAACTGC ACGGCAGCGA ACCCGTCGAG
TTGGTCGAGG CTCTGACCGG GCAAGGTTTG ATCGTGATCA AGTCGGTTTT TGCGCACCGG
GAACCGCTCA TTGCCGGCGC CGCCGACTAC GGGGCTGCCG CCTGCCTCGT GGAAGGGGCG
GGGGGGCCGC TTCCGGGCGG GAACGGAACG GTATGGAACT GGAGCGCCGC GAAGCTTCCC
CGGGAGCTTC CTTTTGTTCT GGCAGGCGGG CTCACGCCGG AAAACGTCGG ATACGCGGTT
GAAGAAGTTC ACCCGGACGC CGTGGATGTC AGCTCGGGTG TCGAGGCTGC GCCGGGACGC
AAAGACTTGT CAAGAGTGAA GGCCTTCATG GACGCGGTTT CACGGAACCG CGGCGGCAAA
ACATACAGGA GGATTTTCGG ATGA
 
Protein sequence
MSDSMKPPGN GFEGNRLSSV AERRAKGREL SVPAVKVCGL TRVEEALGCA ALGVSAIGLV 
FFPKSPRYVS DEQARVIGSS LPRGVCAVGV FVNEDYRTIM KKVELCGLGA VQLHGSEPVE
LVEALTGQGL IVIKSVFAHR EPLIAGAADY GAAACLVEGA GGPLPGGNGT VWNWSAAKLP
RELPFVLAGG LTPENVGYAV EEVHPDAVDV SSGVEAAPGR KDLSRVKAFM DAVSRNRGGK
TYRRIFG