Gene Sfum_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1748 
Symbol 
ID4459930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2140360 
End bp2141298 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content56% 
IMG OID639702517 
Producthypothetical protein 
Protein accessionYP_845870 
Protein GI116749183 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.994794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0128416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGTT CACTGCGCAT AGAGTATCCC GGAGCATTTT ATCATGTGAC GTCCAGAGGA 
AATGAGCGCA AGGAGGTTTT TCTGGACGGA GCGGATCGGG AGCGATTCCT GTCCTACCTG
GACTCGGCTA CTGTCCGCTA TGGAGCGCAG GTCCACCTCT ACTGCCTGAT GCCAAACCAT
TACCATCTGC TGGTTGAGAC TCCTCTCGGA AACCTGTCGC GGATCATGGG ACACATCAAC
GGAGCCTATA CCACCTATTT CAATCTGAAG CACCAGCGTC CCGGGCATTT GTTTCAGGGT
CGTTATAAAG CTATCCTCGT CGACAAAGAC GAATATGTAC GGGAGCTTTC GCGTTACATC
CACCTCAACC CCGTCCGTGC CGGGATCTCC GCGACGCCTG GCGACTACAG GTGGTCGAGC
TATCGGGCCT ACTGCGGTCT GACGCATTCG CCTACGTGGC TCAACCGGAG TCTCATTCTG
TCCCTGTTCG GATCGAGGGC TACGAGGGCC GAGGCAGAAT ACCGGGGTTT CGTGGAGTGC
TCCAAAGTGG AAGATCATCC CGGCCCTCTA ATGAATGTGC TGGCGGCAAC GATCATGGGA
AGCAAATCGT TCGTGAAATC GGTCAAAGAG CGATTTCTTG AAGAAATCCT TCCGGATCGT
GAATTGCCCG CCTTGTCCCG ACTCCTTCCC GGGCCTTCTC CGAAGGCGAT TCGCAAAGCC
GTGGAAGAAA GGTATCCAAC TGACCGCCGG AAGGCTCGAC GGATAAGCAT CTACCTTTGC
CATCGGTACA GCGGGTGCAC TCTGGCTGAA ATCGGGGCTG AATTCGGGAT CGGGCTTTCG
GCGGTCACTC AGATGAGCCG GCGGGTCGCG GAGGCCGTAG GGGAGGACCA GAGCCTGCGA
GAGTCGGTGG AGGAACTGAT ATCAAGACTC CAAAAGTGA
 
Protein sequence
MARSLRIEYP GAFYHVTSRG NERKEVFLDG ADRERFLSYL DSATVRYGAQ VHLYCLMPNH 
YHLLVETPLG NLSRIMGHIN GAYTTYFNLK HQRPGHLFQG RYKAILVDKD EYVRELSRYI
HLNPVRAGIS ATPGDYRWSS YRAYCGLTHS PTWLNRSLIL SLFGSRATRA EAEYRGFVEC
SKVEDHPGPL MNVLAATIMG SKSFVKSVKE RFLEEILPDR ELPALSRLLP GPSPKAIRKA
VEERYPTDRR KARRISIYLC HRYSGCTLAE IGAEFGIGLS AVTQMSRRVA EAVGEDQSLR
ESVEELISRL QK