| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1698 |
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| Symbol | |
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| ID | 4459985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2076073 |
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| End bp | 2078994 |
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| Gene Length | 2922 bp |
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| Protein Length | 973 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639702467 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_845820 |
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| Protein GI | 116749133 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.273362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGAT TCCTGAATGC CCTTCTGAAC CAGAGGTGGC CCGGTTTCAA GGTCAAGCAT
CATGCCGTCC TTCCGGAAAA GGAACCCGTT TTCGGGACGC TGCGCCCGCC TCTGCCCCAA
GCCCTCGAGG AATCCCTGAC ACGCATGGGG ATATCCGCCC TGTACGCGCA TCAGACCGAG
GCGCTGGAGA TGATACGGGC GGGGCGAAAC ATTGTCGTCG CCACCCCCAC CTCCAGCGGG
AAATCCCTTA TTTACAATCT AGCCGTCACT GAGGGCCTTT CCGAGAACCA CGAACAGCGG
GCGCTGTATC TTTTCCCGAT CAAGGCGCTC AGCCGCGACC AACTGGCAAC CCTGGAGAAT
TTCTTCGAAA TGTCGGCCCA GGCCGGCGCG GGAATGCGCT TTCGGACAGC GGTCTATGAC
GGCGACACGA CTCCGTACCA GAGGACCAAG GTCCGCCAGC ACCTCCCGCA TGTCCTGCTC
ACAAACCCCG ATATGATGCA TTACGCTCTG CTCCCCTTCC ACGGCAAATG GGAGAATTTC
TGGAAAGACC TGCGGTTCGT GGTCATCGAT GAGATGCACA CCTACAGGGG GGTGTTCGGA
AGTCATGTCT CCCAGATTTT CCGCAGGTTG AGGCGTATTT GCGAATACTA CGGAACCCAT
CCTCAATTCA TCCTGTTGTC CGCGACGATA TCCAATCCGC GCCAACTCGC CGGACAACTC
ATCGGTGCTC CGGAAGACGA TATCGACGTG GTTGTCGAAA ACGGGTCTCC CCAGGCGAAG
CGTCACTTCG TTTTCCTCGA ACCCGAGGAA ATCGCCGCCG CGCCGGTATC GAGCAGCGCC
GCCCGACTCA TCGCGCATGC GGCCCGAACG GGGCTGAAAA CCATCGCGTT CACCCGATCC
CGCAGGCTCA CCGAACTGGT GCACATGAGC GTCCTCCGGA TGGCTCCTCA GTTGCGCAAG
AGGGTCAGTT CCTACCGGGC GGGCTTTTTG CCCGAGGAGC GCCGGATCAT CGAACAGAAG
CTGTCCGGCG GCGCCCTGGA CGCGGTGATT TCCACGAGCG CGCTGGAAAT GGGGATCGAT
ATCGGAGGGT TGGACCTGTG CATCCTCGTC GGTTATCCGG GAACCGTCAT GACGACCTGG
CAAAGAGGCG GGCGCGTCGG CCGCAGCGGG CGGGAATCGG CCATCGTCCT GCTCCCGCAA
CCGGATGCCC TGGACCAGTA TATCGTTCAT CATCCCCAGG ATTTTCTGAA CAGCGGGTAT
GAGCTGGCGG TCACGGATCC CATGAACGAG GAAATTCTCA AAACGCACTT GCCGTGTGCG
GCGGCCGAGC TTCCGATTCT ACAGCGCGAG GTCGACGCGG ACCCGGTCCT GACCCGCGTC
GTGAGCGAAT TGACCGAATC GGCGAGGCTC CTCAGGGCCG CCGACGGCGA ACAATGGCTA
TCCGCCGCGC TCAACCCCCA CCGAACGGTG GATATCCGTT CGGTCGGACC ATCTTACGCC
ATCTTCATGG AATCGGACTC GGACCGCAAG CTTCCGCTCG GGAAGAACGA AGGCATCCGA
GCTCTGAAGG AATGCCATCC GGGCGCCATC TATCTTCATC GCGGGGAAAC CTACCAGGTG
GAGCGACTGG ACTTGGAAAA ACGCACCATC CAGGTTTCCG CCTGCAACGT GCCCTATTTC
ACCCGGGTCA AAAGCGAGAA GGAAACTGAA ATTCTGGAAG TCTTCGCATC CAAACCGGTC
GGAAACTTCA TCGTTCGACT CGGGCGCCTC AGGGTCACGG AAAACATCCT GGGCTACGAG
AAGAGAAAGC TCTTCACGCA GGAGCTTCTT GGGTCCGATC CTTTGGACTT GCCGCCGCAA
ACGTTCGAGA CCGTGGGATT CTGGATCGAA ATCGAACCCC TGCTGGCAAA AAACATCCAG
GCCGCCAACC TCCATTTCAT GGGCGGCATC CATGCCCTTG AACATGCCGC CATCAGCATG
TTCCCCCTGT TCGCCCTGTG CGATCGAAAC GACATCGGCG GGATATCGAT TCCGCTGCAT
CCGCAGATTG AAAAGGGCGC CGTCTTCATT TACGACGGCT ATCCGGGCGG AATCGGCCTC
GCCGCCAGAG GATACGAGAT CATCGGGGAC CTGCTGCTCA AAACGAAGGA GCTCATCGCG
TCCTGCGATT GCACCGACGG GTGCCCCGGA TGCATCCATT CTCCCAAATG CGGCTCCGGC
AACAAGCCCC TGGACAAGAA GGCCGCGCAC CTCCTCCTGC GATACCTTCT CGGCGAGCTG
AACCTTGCCG AGAAGGTCCC GGCGATCGAT CCGGAGAACA TCCCCGTTGC AGCCTCCAAC
CCACCCGCGC CTGCCGCGGT TCCCGAATAC CGCATCGGGT TCTTCGACCT CGAAACGCAG
CGGCTGGCCG ACGAGGTGGG CGGATGGCAG AACAAGCATC TCATGAAAGT CTCCGTGGCC
GTCCTTCTGG AAACACCCCC GGACACTGTT CACGTCTTTA GGGAAAACGA GGTTCCCGAG
CTCGTGAAAC GCCTGACTGA ACTGGATCTC GTGGTCGGAT TCAATATCGC TCAATTTGAC
TATGCCGTCT TGAAGGCTTA CACAACAGTG GACCTGAACC GCCTGCCCAC GTTCGATCTC
CTGCGGGATA TCCATGAGCG GCTGGGGTTC CGTTTGAGTC TCGGGCATCT GGCCGAGAAA
ACCCTCGGCC GGCCCAAAAT CTCCGACGGG GTGCAGGCTG TCGAATGGTA CCGGCAAAAC
CGGTGGGATT CGCTCATCGA ATACTGCAAA ATGGATGTCC TGCTGACACG TGATCTCTTC
CGCTTTGCTC TCGAAAACGG CTACCTCCTT TACACCGATC GCAGAAACAG GTTGCTTCGA
ATTCCCACGC CATGGAGCCT GGACGCGCTC GTGAAGAAGT GA
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| Protein sequence | MQRFLNALLN QRWPGFKVKH HAVLPEKEPV FGTLRPPLPQ ALEESLTRMG ISALYAHQTE
ALEMIRAGRN IVVATPTSSG KSLIYNLAVT EGLSENHEQR ALYLFPIKAL SRDQLATLEN
FFEMSAQAGA GMRFRTAVYD GDTTPYQRTK VRQHLPHVLL TNPDMMHYAL LPFHGKWENF
WKDLRFVVID EMHTYRGVFG SHVSQIFRRL RRICEYYGTH PQFILLSATI SNPRQLAGQL
IGAPEDDIDV VVENGSPQAK RHFVFLEPEE IAAAPVSSSA ARLIAHAART GLKTIAFTRS
RRLTELVHMS VLRMAPQLRK RVSSYRAGFL PEERRIIEQK LSGGALDAVI STSALEMGID
IGGLDLCILV GYPGTVMTTW QRGGRVGRSG RESAIVLLPQ PDALDQYIVH HPQDFLNSGY
ELAVTDPMNE EILKTHLPCA AAELPILQRE VDADPVLTRV VSELTESARL LRAADGEQWL
SAALNPHRTV DIRSVGPSYA IFMESDSDRK LPLGKNEGIR ALKECHPGAI YLHRGETYQV
ERLDLEKRTI QVSACNVPYF TRVKSEKETE ILEVFASKPV GNFIVRLGRL RVTENILGYE
KRKLFTQELL GSDPLDLPPQ TFETVGFWIE IEPLLAKNIQ AANLHFMGGI HALEHAAISM
FPLFALCDRN DIGGISIPLH PQIEKGAVFI YDGYPGGIGL AARGYEIIGD LLLKTKELIA
SCDCTDGCPG CIHSPKCGSG NKPLDKKAAH LLLRYLLGEL NLAEKVPAID PENIPVAASN
PPAPAAVPEY RIGFFDLETQ RLADEVGGWQ NKHLMKVSVA VLLETPPDTV HVFRENEVPE
LVKRLTELDL VVGFNIAQFD YAVLKAYTTV DLNRLPTFDL LRDIHERLGF RLSLGHLAEK
TLGRPKISDG VQAVEWYRQN RWDSLIEYCK MDVLLTRDLF RFALENGYLL YTDRRNRLLR
IPTPWSLDAL VKK
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