| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1696 |
|---|
| Symbol | |
|---|
| ID | 4459983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2073879 |
|---|
| End bp | 2074889 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639702465 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_845818 |
|---|
| Protein GI | 116749131 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1313] Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGTT CCACTTGTTC AATCATGTGC CCGCCTCGGG CGCAACCCGT GAGGGTCTTT
TTTGCGAGGG AGTCTCCGGT GCCGGCAGCT TACCTTGAAG CACATGCAAC GGGGCGGTTG
GCGGAGAGCA TTCGTCGCAG CTTCCGGTGG ATGAGAAAGT GCACCATGTG CCCGCGGATG
TGCGGAGTCG ACCGCATGTC GGGCGAAAAA GGCACCTGCC GAACGGGAAG GCATGCCGTG
GTGGCGAGCT ATGGCCCGCA TTACGGAGAG GAAAGACCTC TGGTCGGCAG AGGCGGTTCC
GGAACGATAT TCTTCTCTCA CTGCAACCTG TTTTGCAGTT TCTGCCAGAA TTGGGAAATC
AGCCATGGCG GCGAAGGGAG CCCCGTGCCC GCGGAGACCC TGGCTCAAGT CATGATCCGG
CTCCAGGACC AGGGATGCCA CAACATCAAT TTCGTCACTC CTTCCCATGT CATCCCCCAG
ATTCTGGAAG CCCTTCCGAT TGCCGTGGAA AAAGGGCTTC ACGTACCGTT GGTGTACAAC
TGCGGCGGAT ACGAGCGGGT GTCCGCCTTA AAGCTTCTGA ACGGAATTGT CGATATATAC
ATGCCGGATT TTAAATTCTG GGACAGCGAA ACAGCGGGGT CCGTGTGCGA CGCCGCGGAC
TATCCCGAGA GGGCCAGGCG TGCGTTGCGC GAAATGCACA GGCAGGTCGG GGATCTGGTG
TTGGACGCCC GAGGCATTGC CCGACGGGGG TTGCTTGTGC GTCACCTGGT GTTGCCCGAC
GGGCTTGCAG GGACCGCTCA CGTCATGCGT TTTCTTGCTG AGGAGATATC CGTCGACACT
TACGTGAATG TCATGGATCA GTATCATCCC TGCGGAGAGG CGGTCGGGGC GCCGCACCTT
GGCCGGAGAA TCAGCCGGGA GGAATTTGAA GCGGCTCTGA GAAACGCTGT GCAGGCGGGG
CTCAGACGGC TGGATGACAG GCACAGGCAT TCGGTTTTTC TGGAATTCTG A
|
|---|
| Protein sequence | MCGSTCSIMC PPRAQPVRVF FARESPVPAA YLEAHATGRL AESIRRSFRW MRKCTMCPRM
CGVDRMSGEK GTCRTGRHAV VASYGPHYGE ERPLVGRGGS GTIFFSHCNL FCSFCQNWEI
SHGGEGSPVP AETLAQVMIR LQDQGCHNIN FVTPSHVIPQ ILEALPIAVE KGLHVPLVYN
CGGYERVSAL KLLNGIVDIY MPDFKFWDSE TAGSVCDAAD YPERARRALR EMHRQVGDLV
LDARGIARRG LLVRHLVLPD GLAGTAHVMR FLAEEISVDT YVNVMDQYHP CGEAVGAPHL
GRRISREEFE AALRNAVQAG LRRLDDRHRH SVFLEF
|
|---|
| |