| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1669 |
|---|
| Symbol | rplM |
|---|
| ID | 4460041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2047179 |
|---|
| End bp | 2047607 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639702438 |
|---|
| Product | 50S ribosomal protein L13 |
|---|
| Protein accession | YP_845791 |
|---|
| Protein GI | 116749104 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0102] Ribosomal protein L13 |
|---|
| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000843127 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAA TCAGCGCGAA GTTTGAAGCA AGTCAGCGCA AATGGATCCT GGTGGATGCC
GAGAACCAGG TGCTGGGAAG ACTCGCCAGC CGTATCGCCA TGCGGCTGAG AGGAAAGCAC
CTGCCCGCAT TTACCCCCCA CGTGGACCTC GGGGACTTTG TGGTGGTGAT CAACGCCGAC
AAGGTGCAGC TGACCGGAAA TAAATGGGAC CAGAAACTGT ACTATCGCCA CAGCGGTTAC
ATGGGTGGGG TGAAAGTGCA GAGTGCGCGG AAGCTCAATG CCGGCAATCC GGAGAAGCTG
TTGCGATTGG CGGTGTGGGG CATGCTTCCC AAGAACCGGC TCGGCCGGAA GCTCATCAAG
AAGCTCAAGG TCTACAAGGG CGCCGAGCAT CCGCATGAAG CTCAGCAACC GACGAGGATC
GCCTTGTAG
|
|---|
| Protein sequence | MKTISAKFEA SQRKWILVDA ENQVLGRLAS RIAMRLRGKH LPAFTPHVDL GDFVVVINAD
KVQLTGNKWD QKLYYRHSGY MGGVKVQSAR KLNAGNPEKL LRLAVWGMLP KNRLGRKLIK
KLKVYKGAEH PHEAQQPTRI AL
|
|---|
| |