| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1632 |
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| Symbol | |
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| ID | 4460069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 2000970 |
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| End bp | 2003603 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639702401 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_845754 |
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| Protein GI | 116749067 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.253181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.172693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAT CAGGTCGTTA CGGCTTTCTG CCGGTGGTGC CGGCCTTCAT TCTTGTACTC
GCCCTGACGA CGGGTCTGCA GGCCGGGGAA AAACCCGATG AGCCAAGCGC GAGGACCGGG
ACATCGGCCA CAAGTCCTGA GAAGTTGCCG GATATTCTGG CGGAAGGCGC CTCCAAACTC
CAAAACAGCA TCACCGCCCT GCGGCAGCAG CAAGAGCCGG CCAAACAGAT GCTCGAGGGC
CTCGTCAAGG AGAAAGAGGA GCTGCAGGCC TGGATCGCGG CGTTGAATGC CTCCATGGCG
GTGAACGATC TGACCCTGGC CAAGGCCCGG GAAGCGCTGA AGGCTCTGAT TGGGCACGAG
GAGCAAACCG GCGCCCGTTT GAAAGGACTT GCGGGTGAAG AGGATGCCTT GCGGCAGAAG
ATCGAGGAGC ATGCCGCCGC TCTACTGTCG GTGGAAGCGT TGATGGCCGA GTTGGCCAAA
ACCGATCATC CTCTGCGCAA ATCCAAGGAA CTGGAGAAGA TTTACCGCGC ATATCGGCAG
CTCGGCCAGG AATATGACAA GGCGGCAAAA GCCCATCAGG GAATCGTGGG GAAAAGCGTC
GAGAATCTGC AGAGCTCCAT GACGCTGCTC GCCGAAACCA GGACGAAACT GGAGCAGGAC
TACCTCCAAA AAGCTCTCAA AGGGGAACTG CTCAAGCGTC AAACCTTTCA GCACCGGCTG
CTGGAAATCG GGCAGATTGC GCTCACTCTG GCGGCCCTGC CCGGCAAGGC TTATGCCTGG
CTGGTGGAGA TGGGCCGCTC CGGAGTGTTG TTCTCGTTCG TTCAGGAGAA CTGGACCAAT
CTCACCGGGC TGTTTCTCTT CCTGGTATTG CTGAGCGCGG CGACGGTCCG CTTGAAGAAA
CCGGCGCTGC TCAGGCTGGT CGGTTGGGAG GAACGCTTGA CGGAGCTTGG CCTGAGAGTG
CTCCTGACCA TAGTGTCGGT TTCCTTGAAG CGTCTCTTCT CCCTCGGTTT CGTCATCTGG
CTCTACGTGG CGTTCTGGTC GCTGGGGATC CTTTCGCACA AGGTGGCCTG GCTGGTCTGG
TCCCTGGCGG CGAGCCTGGT GGCGTTGCGC ATCGTTTTGA ACGTGCTCCA TCAATGTCTG
GCCGGCGAGG AAGCAGGCGG AGTCCTGCCC GTGCCCGGGG ATTTGGCCCG GTTTTTCCGA
CGGCACTTAT CGTTCATGGC CATCTTCGCC GTTCTCCTGC ACATCTCCAT TCTACCCAAC
TCGGAAATCC TGGGGTTCAC GCCCGAAGGC GCCAACAGTC TGCGGAGCCT CGTCCAGGTC
GTGCTGTTGG GCTGGGCACT GTGGCTCATG AGGCCGAATC ATTTCGATCC CTTCCTTTCG
GTTCTGCCCG TACCGGCTTT CGTGAAGAAC AAGGGATTCC TGCGGGCTCT GAGGGTCGCG
GCGTTTCTGG TGTTCGCTTT CGTGGTGGTT GCAGGTTTGC TGGGGATGAA ATTCCTCTTC
GAATACGCAG CCCAAGGGGC CTATTTCACC GTCGTGGTGC TCGCCCTGGC ATGGATTCTT
GGAGAAGGCG CGCACACCAT CCTGCGCTTG ACGCTCCATC CAAAAATGGG GCTGTTGGCC
CGACGATTCC CGCGGCGAGA TCAGCTGTTC CTGAATTCCT ACCGGTTCCT GACTCGGGCG
GTAAGGGTGC TTTTGGCGTG CGTGGCGCTG CTGGTGGCCC TCAATGCCTG GGGTGTTCCC
GCGGACCGAC TGGGCTGGGC CTTCAGGTGG CTCGGCTGGG GTCCATCCGT CGGCCCCGTT
CGACTGACCC CTGTCTCCAT CGGGCTCACC GCTTTGGTCA TTTTCCTGGG GTTCCGGCTC
TCCCGCGTGC TGCGCGCTTT CATGGAGCTC AAATTCTTTC CCGCAAAGGA CTGGGATTCC
GGTATCAAAT ACACCGTATC CACGAGCATG CATTATGTGA TCCTGGTCCT CACGGCATTG
ATCGCGCTGA ACACCCTGGG CATATCCCTC ACCAATCTGG CCCTGGTTGC GGGCGGCCTG
GGCGTGGGGA TCGGCTTTGG TCTTCAGAAC ATCGTCAGCA ATTTTCTGAG CGGTTTGATC
CTCCTGTTCG AACGTCCCGT CAAAGTCGGG GATATGCTGG TCATTGACGG CCACTGGGGG
ACGGTCAAAG AGATCCGGGT GCGAAGCACG ATCTTCCAGA CTTTCGACCG GTACTTCCTG
ATCATTCCCA ACTCGGAGCT GATCTCCGGC AAGATAATCA ACTGGACTTA CGGGGGATGG
GGGATCAATC GCCTCACGCT CAAAGTCGGG GTGTCCTACA GCTCGGACCC GTTCAAGGTC
ACGCGGATCC TTGAAGAAAT CTGTCGCGCC AACCCGCGGG TCCTGGATGA CCCGCCTCCC
CAGATCTTCT TCGAAGCTTA TGGCGACAGC TCGCTGAATT TCAATATTTG GGTTTACCTG
GCCACGCCGG GCAGCCGGAT TCCCGCCACT CATGAGCTGA ACAGCGCCAT TTTCGAGGTG
TTCCAGGCTC AGGGCGTCGA GATTCCATTT CCTCAGCGCG ACCTGCATGT CCGCAGTTGG
TCGCGCGAGG CTGCGCCGGC CAGGCCCGCG CGGGGCGACA AGCATTCCGA ATAG
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| Protein sequence | MRKSGRYGFL PVVPAFILVL ALTTGLQAGE KPDEPSARTG TSATSPEKLP DILAEGASKL
QNSITALRQQ QEPAKQMLEG LVKEKEELQA WIAALNASMA VNDLTLAKAR EALKALIGHE
EQTGARLKGL AGEEDALRQK IEEHAAALLS VEALMAELAK TDHPLRKSKE LEKIYRAYRQ
LGQEYDKAAK AHQGIVGKSV ENLQSSMTLL AETRTKLEQD YLQKALKGEL LKRQTFQHRL
LEIGQIALTL AALPGKAYAW LVEMGRSGVL FSFVQENWTN LTGLFLFLVL LSAATVRLKK
PALLRLVGWE ERLTELGLRV LLTIVSVSLK RLFSLGFVIW LYVAFWSLGI LSHKVAWLVW
SLAASLVALR IVLNVLHQCL AGEEAGGVLP VPGDLARFFR RHLSFMAIFA VLLHISILPN
SEILGFTPEG ANSLRSLVQV VLLGWALWLM RPNHFDPFLS VLPVPAFVKN KGFLRALRVA
AFLVFAFVVV AGLLGMKFLF EYAAQGAYFT VVVLALAWIL GEGAHTILRL TLHPKMGLLA
RRFPRRDQLF LNSYRFLTRA VRVLLACVAL LVALNAWGVP ADRLGWAFRW LGWGPSVGPV
RLTPVSIGLT ALVIFLGFRL SRVLRAFMEL KFFPAKDWDS GIKYTVSTSM HYVILVLTAL
IALNTLGISL TNLALVAGGL GVGIGFGLQN IVSNFLSGLI LLFERPVKVG DMLVIDGHWG
TVKEIRVRST IFQTFDRYFL IIPNSELISG KIINWTYGGW GINRLTLKVG VSYSSDPFKV
TRILEEICRA NPRVLDDPPP QIFFEAYGDS SLNFNIWVYL ATPGSRIPAT HELNSAIFEV
FQAQGVEIPF PQRDLHVRSW SREAAPARPA RGDKHSE
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