Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1617 |
Symbol | |
ID | 4460086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1973542 |
End bp | 1975344 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639702386 |
Product | ASPIC/UnbV domain-containing protein |
Protein accession | YP_845739 |
Protein GI | 116749052 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAGAG TACGATTTGC CGGCATCATC AAGCGGTGTT TCGCTTTGAC ATTTGCGCTG CTCTTCCCGG CCACCGCATT CCCTGCGGCT GCTCTCGCGG CAACGAGCGC GCATGCTCGG CCAGCCGAAC AATCCTCGTC GAGCGGCCCG ATATTCGTGG ACATCAGTGA GACTTCCGGG CTGGATTTCG TCCACTTCAA CGGCATGTCG GGCGAGTACT ACTTCCCGGA GATGATGGGC CAGGGCTGCG CGTTTCTCGA CTACGACAAC GATGGCGACC TGGACGTCTA CCTCGTGCAG GGCAGCATGC TCGGCCCCGG GAAGACACTT GCCGATGCGC TTTCCCCGCC TCGAGATTCC AATCCCCGGC ACCGTCTCTA TCGTAACGAT CTCACGATCG GCAGCGACGG CAGCAGGACC TTGCGTTTTG TGGATGTGAC GGATCAGAGC GGAATCAATA TCTCGGATTA TGGAATGGGA GTTGCCACCG GCGATTTCAA CAATGACGGC TGGGTCGACA TCTTTGTCAC CAACCTCGAG TCGACCAGGA TGTTTTACAA CAACGGTGAC GGGACCTTTA CCGATGTGAC CGAAAAGTCC GGCACGGGCG GCAGGCTGTG GGCCACGAGC GCCTCCGCAT TCGACTACGA CCGGGACGGA TGGCTCGATC TCTATGTGGC GAACTACCTC GATTTCGACC TGGTCCTGAA CAGGAAATGC TACGCGCCGA ACAGCCGCAG GGACTATTGC GGCCCGTCGT CTTTCACGCC GCAGTCCCAC CGTCTTTTTC ACAACAAAGG GGACGGGACA TTCGAGGACG TGACGACGAG GGTGCTGGCC GACTACAAAG CGTATGCGGG ACTGGGAGTC GTGGCCCTAG ATGTCGACGG CGACGGCTGG CCGGACATCT ATGTGGCCAA CGACGGCTAC CCGAATCAGC TCTGGTTGAA CAGGGAAGGA AAGATGTTCC GGGAAGACGC CCTTTTTGCC GGTGTCGCTC TGGACCGGGA TGGACGCCCT CAGGGCAGTA TGGGGATTGC CGTGGGCGAT TTCGATTCGG ATGGCGATGA AGACCTCTTC GTAACCAACA TCATGGGAGA GACCAACACC CTGTATGCCA ACGACGGACA GGGTCTGTTC GAAGACCGGA CCATAGCGAC GGGGCTCGCT GCGGCCACCG TTCCATATAC GTCGTTCGGA ACCGGCTGGA TCGATTACGA CAACGACGGT TGGCTTGATC TCTTTATGGT AAACGGCGCC GTGCTGATCA TCGAGGAACT CGCCAGAGCG GGAGACCTTT ACCCGCTCCG TCAACCCAAG CAATTGTTCC GGAACGAAGG CGGGAAAAGG TTCGTCGACA TTACCTCCGA TGCCGGCAAG GATCTGTTCG GCCCGGAAGT CAGCCGGGGG CTTGCCTTCG GAGACGTGGA CAACGACGGG GATACGGATC TCCTGGTCGC CAACAACAAC GGCCATGTGA GGCTGTATGA GAACAAGGCG GGGCAGCAGA AGAAGTGGTT GGGCTTGAGG CTGGTGGATT CTCAAGGAAA GCGGGATATG ATCGGGGCGC TGGCGGGCCT CAAGCGCGCC GGCATGCCGA CTCTCTGGCG CCGCGTTCGG ACGGATGGCA GCTATTGTTC GGCCAATGAT CCGAGGCTCC TTTTCGGTCT GGGCGACAGT GAAACGGTGG ATTCCATCGA GATTTACTGG CCGGACGGGA CGAAAGAGGT ATGGGAGAAA CCGACGCCCA TGAAGTACAC TACGCTGAAG AAAGGCTCCG TGAACAAGGA GACCGGGCAA TGA
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Protein sequence | MRRVRFAGII KRCFALTFAL LFPATAFPAA ALAATSAHAR PAEQSSSSGP IFVDISETSG LDFVHFNGMS GEYYFPEMMG QGCAFLDYDN DGDLDVYLVQ GSMLGPGKTL ADALSPPRDS NPRHRLYRND LTIGSDGSRT LRFVDVTDQS GINISDYGMG VATGDFNNDG WVDIFVTNLE STRMFYNNGD GTFTDVTEKS GTGGRLWATS ASAFDYDRDG WLDLYVANYL DFDLVLNRKC YAPNSRRDYC GPSSFTPQSH RLFHNKGDGT FEDVTTRVLA DYKAYAGLGV VALDVDGDGW PDIYVANDGY PNQLWLNREG KMFREDALFA GVALDRDGRP QGSMGIAVGD FDSDGDEDLF VTNIMGETNT LYANDGQGLF EDRTIATGLA AATVPYTSFG TGWIDYDNDG WLDLFMVNGA VLIIEELARA GDLYPLRQPK QLFRNEGGKR FVDITSDAGK DLFGPEVSRG LAFGDVDNDG DTDLLVANNN GHVRLYENKA GQQKKWLGLR LVDSQGKRDM IGALAGLKRA GMPTLWRRVR TDGSYCSAND PRLLFGLGDS ETVDSIEIYW PDGTKEVWEK PTPMKYTTLK KGSVNKETGQ
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