Gene Sfum_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1617 
Symbol 
ID4460086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1973542 
End bp1975344 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content59% 
IMG OID639702386 
ProductASPIC/UnbV domain-containing protein 
Protein accessionYP_845739 
Protein GI116749052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGAG TACGATTTGC CGGCATCATC AAGCGGTGTT TCGCTTTGAC ATTTGCGCTG 
CTCTTCCCGG CCACCGCATT CCCTGCGGCT GCTCTCGCGG CAACGAGCGC GCATGCTCGG
CCAGCCGAAC AATCCTCGTC GAGCGGCCCG ATATTCGTGG ACATCAGTGA GACTTCCGGG
CTGGATTTCG TCCACTTCAA CGGCATGTCG GGCGAGTACT ACTTCCCGGA GATGATGGGC
CAGGGCTGCG CGTTTCTCGA CTACGACAAC GATGGCGACC TGGACGTCTA CCTCGTGCAG
GGCAGCATGC TCGGCCCCGG GAAGACACTT GCCGATGCGC TTTCCCCGCC TCGAGATTCC
AATCCCCGGC ACCGTCTCTA TCGTAACGAT CTCACGATCG GCAGCGACGG CAGCAGGACC
TTGCGTTTTG TGGATGTGAC GGATCAGAGC GGAATCAATA TCTCGGATTA TGGAATGGGA
GTTGCCACCG GCGATTTCAA CAATGACGGC TGGGTCGACA TCTTTGTCAC CAACCTCGAG
TCGACCAGGA TGTTTTACAA CAACGGTGAC GGGACCTTTA CCGATGTGAC CGAAAAGTCC
GGCACGGGCG GCAGGCTGTG GGCCACGAGC GCCTCCGCAT TCGACTACGA CCGGGACGGA
TGGCTCGATC TCTATGTGGC GAACTACCTC GATTTCGACC TGGTCCTGAA CAGGAAATGC
TACGCGCCGA ACAGCCGCAG GGACTATTGC GGCCCGTCGT CTTTCACGCC GCAGTCCCAC
CGTCTTTTTC ACAACAAAGG GGACGGGACA TTCGAGGACG TGACGACGAG GGTGCTGGCC
GACTACAAAG CGTATGCGGG ACTGGGAGTC GTGGCCCTAG ATGTCGACGG CGACGGCTGG
CCGGACATCT ATGTGGCCAA CGACGGCTAC CCGAATCAGC TCTGGTTGAA CAGGGAAGGA
AAGATGTTCC GGGAAGACGC CCTTTTTGCC GGTGTCGCTC TGGACCGGGA TGGACGCCCT
CAGGGCAGTA TGGGGATTGC CGTGGGCGAT TTCGATTCGG ATGGCGATGA AGACCTCTTC
GTAACCAACA TCATGGGAGA GACCAACACC CTGTATGCCA ACGACGGACA GGGTCTGTTC
GAAGACCGGA CCATAGCGAC GGGGCTCGCT GCGGCCACCG TTCCATATAC GTCGTTCGGA
ACCGGCTGGA TCGATTACGA CAACGACGGT TGGCTTGATC TCTTTATGGT AAACGGCGCC
GTGCTGATCA TCGAGGAACT CGCCAGAGCG GGAGACCTTT ACCCGCTCCG TCAACCCAAG
CAATTGTTCC GGAACGAAGG CGGGAAAAGG TTCGTCGACA TTACCTCCGA TGCCGGCAAG
GATCTGTTCG GCCCGGAAGT CAGCCGGGGG CTTGCCTTCG GAGACGTGGA CAACGACGGG
GATACGGATC TCCTGGTCGC CAACAACAAC GGCCATGTGA GGCTGTATGA GAACAAGGCG
GGGCAGCAGA AGAAGTGGTT GGGCTTGAGG CTGGTGGATT CTCAAGGAAA GCGGGATATG
ATCGGGGCGC TGGCGGGCCT CAAGCGCGCC GGCATGCCGA CTCTCTGGCG CCGCGTTCGG
ACGGATGGCA GCTATTGTTC GGCCAATGAT CCGAGGCTCC TTTTCGGTCT GGGCGACAGT
GAAACGGTGG ATTCCATCGA GATTTACTGG CCGGACGGGA CGAAAGAGGT ATGGGAGAAA
CCGACGCCCA TGAAGTACAC TACGCTGAAG AAAGGCTCCG TGAACAAGGA GACCGGGCAA
TGA
 
Protein sequence
MRRVRFAGII KRCFALTFAL LFPATAFPAA ALAATSAHAR PAEQSSSSGP IFVDISETSG 
LDFVHFNGMS GEYYFPEMMG QGCAFLDYDN DGDLDVYLVQ GSMLGPGKTL ADALSPPRDS
NPRHRLYRND LTIGSDGSRT LRFVDVTDQS GINISDYGMG VATGDFNNDG WVDIFVTNLE
STRMFYNNGD GTFTDVTEKS GTGGRLWATS ASAFDYDRDG WLDLYVANYL DFDLVLNRKC
YAPNSRRDYC GPSSFTPQSH RLFHNKGDGT FEDVTTRVLA DYKAYAGLGV VALDVDGDGW
PDIYVANDGY PNQLWLNREG KMFREDALFA GVALDRDGRP QGSMGIAVGD FDSDGDEDLF
VTNIMGETNT LYANDGQGLF EDRTIATGLA AATVPYTSFG TGWIDYDNDG WLDLFMVNGA
VLIIEELARA GDLYPLRQPK QLFRNEGGKR FVDITSDAGK DLFGPEVSRG LAFGDVDNDG
DTDLLVANNN GHVRLYENKA GQQKKWLGLR LVDSQGKRDM IGALAGLKRA GMPTLWRRVR
TDGSYCSAND PRLLFGLGDS ETVDSIEIYW PDGTKEVWEK PTPMKYTTLK KGSVNKETGQ