Gene Sfum_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1571 
Symbol 
ID4460141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1925043 
End bp1925414 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content60% 
IMG OID639702338 
Productribosomal protein L18 
Protein accessionYP_845693 
Protein GI116749006 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.246987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA AGACGAACCC ACGGGAAACG GCCCGCCTGA AGCGCAAGAA AAGGATCCGG 
AAGAAGCTCC AGGGAGCTCC CGAACGTCCG AGACTCACCG TTTTCCGAAG CGATAAGCAT
ATCTACGCCC AGATCGTGGA CGACACGCGC GGCTCCACGC TCGTGTCCGC GTGCACCCTG
TCCCCCGATT ACAAGGAAAT GGAAGCTTTG AAGGGGAAGG TCGGAGCCGC CAAACGAGTT
GGAGAGCTGA TTGCACGCAA GGCCCTGGAA AAAGGCATCA CAAAGGTTGT CTTCGATCGC
AACGGCTACA TTTATCACGG CCGCGTGCAG GCCCTGGCGG ACGCCGCCCG GCAGGCGGGC
TTGGACTTTT AG
 
Protein sequence
MADKTNPRET ARLKRKKRIR KKLQGAPERP RLTVFRSDKH IYAQIVDDTR GSTLVSACTL 
SPDYKEMEAL KGKVGAAKRV GELIARKALE KGITKVVFDR NGYIYHGRVQ ALADAARQAG
LDF