Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1567 |
Symbol | rplE |
ID | 4460137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1923249 |
End bp | 1923788 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639702334 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_845689 |
Protein GI | 116749002 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGAC TGCGGGAAAC ATACCGGAAC GAGATAGCTC CCAAGCTTTC CGAACAGTTC AAGTACAAGA GCCCGATGCA GATACCCAGG TTGAGCAAGA TCATCCTGAA CATGGGTTTG GGCGATGCGA TTCAGAACAT CAAGATACTG GACTCCGCGG CCGAGGAGCT CGGCATGATC AGCGGTCAGA AGCCCGTGAT CACGAGAGCC CGTCAGAGCA TCGCCGCGTT CAAGCTTCGC AAGGGAATGC CCATCGGCTG CATGGTTACC CTGAGAGGGG ACCGGATGTA CGAGTTTTTC GATAAGCTGG TGAATGTCGC CCTGCCCCGC GTTCGTGACT TCCGGGGAGT TTCTTCGCGA GCCCTCGATG GCCGCGGGAA CTACACCCTC GGCATCAAGG AACATATCAT TTTCCCGGAA ATCGACTACG ACAAGATCGA TAAGATCAAA GGCATGAACA TCACCATCGT GACGACGGCA AAGAACGACG ACGAAGCGCG AACGCTTCTG GCGTTGATGG GCATGCCGTT CAAACAGTAG
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Protein sequence | MARLRETYRN EIAPKLSEQF KYKSPMQIPR LSKIILNMGL GDAIQNIKIL DSAAEELGMI SGQKPVITRA RQSIAAFKLR KGMPIGCMVT LRGDRMYEFF DKLVNVALPR VRDFRGVSSR ALDGRGNYTL GIKEHIIFPE IDYDKIDKIK GMNITIVTTA KNDDEARTLL ALMGMPFKQ
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