Gene Sfum_1557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1557 
Symbol 
ID4461102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1918671 
End bp1918964 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content52% 
IMG OID639702324 
Productribosomal protein L25/L23 
Protein accessionYP_845679 
Protein GI116748992 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.271789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.935147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGA AATCGTACCG GATTCTCAAG CGTCCTCTAG TCACTGAAAA GAGCACCACC 
GAGAAGGATG AGCACAACAA GCTCTTTTTC GAAGTGGACC GCCGGGCGAA CAAGATCGAG
ATCAAGGAGG CGGTGGAGCA GATTTTCAAG GTGGATGTGC TGGATGTGGC GACGATGAAT
GTCCGGGGGA AGAAGAAGCG CGTCGGCCGT TACTTTACGA AACGAGCCGA CCGGAAAAAG
GCTATGGTCA CGATCAAGCC CGGTCAGCGC GTTGAATTCT TTGAAGGTGT ATAG
 
Protein sequence
MNEKSYRILK RPLVTEKSTT EKDEHNKLFF EVDRRANKIE IKEAVEQIFK VDVLDVATMN 
VRGKKKRVGR YFTKRADRKK AMVTIKPGQR VEFFEGV