| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1555 |
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| Symbol | |
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| ID | 4461100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1917378 |
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| End bp | 1918010 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639702322 |
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| Product | ribosomal protein L3 |
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| Protein accession | YP_845677 |
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| Protein GI | 116748990 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00791107 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.982603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAAAG CAATTGTCGG ACGCAAGCTG CAAATGTCCC AGATTTTCGC CGAGGACGGG
ACGGCTGTCC CGATCACGCT GATCCAGGCG GGACCATGTA CCGTCACTCA GGTGAAGACG
CCCGAGAGGG ACGGCTATTC CGCCCTTCAG ATCGGTTTCG GAAGCCGTAA GCCCAAGAAC
GTCAACAAGC CCATGAAAGG GCATCTCGAC AAGGTCGGCA AGGGGTATTT CGAAGTGCTG
CGGGAAATCC GCATGGAGAA CGCTTCCGAT CACGAGGTCG GGGAGGACCT TGCCGCTGAC
GTTTTCGAAA TCGGCGAGCG CATCGACGTT ATCGGAACGA CCAAGGGAAA GGGCTACGCC
GGCACGATCA AGCGATGGGG ATTTCAGCGC GGACCTTCCG GCCACGGTTC CAAGAACATC
AGGGAACCCG GCTCGACGGG CAACGCCACC TTCCCCGGCC GAGTGATCAA GGGCAAGAAG
ATGCCGGGGC AAAAGGGAAA CAAGCGCACC ACCGTCATGA ACCTGCGCAT CATCGACGTG
CGCCCCGAGG AGAATCTGCT GATCGTCAAA GGTGCCGTCC CGGGTTCGCA AAACGGGATC
GTGCTCATCC GCAAGACAAA CAGGGCCAAG TAG
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| Protein sequence | MIKAIVGRKL QMSQIFAEDG TAVPITLIQA GPCTVTQVKT PERDGYSALQ IGFGSRKPKN
VNKPMKGHLD KVGKGYFEVL REIRMENASD HEVGEDLAAD VFEIGERIDV IGTTKGKGYA
GTIKRWGFQR GPSGHGSKNI REPGSTGNAT FPGRVIKGKK MPGQKGNKRT TVMNLRIIDV
RPEENLLIVK GAVPGSQNGI VLIRKTNRAK
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