Gene Sfum_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1535 
Symbol 
ID4460620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1895801 
End bp1896517 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content60% 
IMG OID639702301 
Producthypothetical protein 
Protein accessionYP_845658 
Protein GI116748971 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.714061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACC CGGATACGGT TCCGCCCCAT ACCGTGCGTG TGAGCAAGAA GGCGAAGCGA 
ATCATCCTGA GGATGCTGCC GGGCTGCAGG CTCGAGGTCG TTATTCCCCC CGGTTTCAAT
CGGGAAAAAG TGCCGGAGAT TCTCGACCGG AAGAGGGACT GGATCGAGTT GGTCGCCGGG
CGAAGCCGGT TGCATGAAAA CAGCTCGGAG TCCCGGTTGT TTCCGCCGCG GACCATTCAT
CTTCGTGCGG TGGATGCCGA ATTCGATGTT TTGTGTGTTC CCGGGCCGGG GCGAAGTGTC
CGACTGGTTC GGACGGCCCC CGCGCGCCTC GAGTTGAGTG GAGACTTGAC GGACCCCGAA
ACATGCCGCC ACTTGTTCAA AGAGTGGCTC AAGCAAGAGG GACAGCGTCA CCTTGTCCCC
TGGTTGGGGA GGGTCGGCGC CTCCGCGGGA ATTCCCTTCC GCAAGGCACT GGTTCGGGGG
CAGAAGAGCC GGTGGGGGAG TTGTTCGCTC AAAGGCACCA TCAGCCTCAA CTACAAACTT
CTGTTCCTGC CTCCCGAATT GGTTCGATAT ATTCTGATCC ATGAGCTTTG CCACATGGAG
CAGATGAATC ATTCCCCCCA GTTCTGGGCC CGCGTCGGCT CTCTGGAACC TTCCTACAGA
ACGTTGGACG CCGCCATGAG CAAGGCGCGC CGATTTGTCC CCGAATGGGC CGACTGA
 
Protein sequence
MKDPDTVPPH TVRVSKKAKR IILRMLPGCR LEVVIPPGFN REKVPEILDR KRDWIELVAG 
RSRLHENSSE SRLFPPRTIH LRAVDAEFDV LCVPGPGRSV RLVRTAPARL ELSGDLTDPE
TCRHLFKEWL KQEGQRHLVP WLGRVGASAG IPFRKALVRG QKSRWGSCSL KGTISLNYKL
LFLPPELVRY ILIHELCHME QMNHSPQFWA RVGSLEPSYR TLDAAMSKAR RFVPEWAD