| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1527 |
|---|
| Symbol | |
|---|
| ID | 4460612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1886159 |
|---|
| End bp | 1887334 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639702293 |
|---|
| Product | Alpha-methylacyl-CoA racemase |
|---|
| Protein accession | YP_845650 |
|---|
| Protein GI | 116748963 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.351028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGGAG CACTCTGCGG TTTCACGGTG TTGGACCTGT CCCGACTCCT TCCGGGCCCG
TTCTGTTCCA TGCTGCTCGC GGACCTCGGG GCCGACGTCA TCAAGATTGA GGAGCCCGGA
CGCGGCGACT ACATTCGCTG GTGGCCTCCC AGGGTCGGCG GCGGCAGCGG CTACCATGTC
GTCCTCAACC GCAACAAACG GTCTCTGACC CTCAATCTGA AGGCACCCGA AGGGAAGGAC
ATTTTCAGAA GCCTGGCGAA AAATGCGGAC GTGGTGTTGG AGAGTTTCCG TCCGGGCGTG
ATGGACAAGA TGGGATTGGG CTATGAACGG CTCGCAGCCG TCAATCCCGG CATCGTCTTT
TGTGCGATCT CCGGGTACGG GGCCTACGGC CCGATGGCGC TCAAGGCCGG CCATGACGTG
AACTACCTCG CCCGCAGCGG TGTGCTTTCC TACAGCGGCC GGCGTGCACC CACCATGACC
GGGGTTCAGA TCGCCGATCT GGGCGGCGGC GGTCTTCCTG CCGCTTTCGG CATTCTGGCC
GCCCTGCTCG CCCGGACACG CACCGGCAAA GGCCAGTTCG TGGATGTTTC CATGACGGAC
GGCTCACTGC TATGGAATTG CCTGCGCTGG GGAAAACTTC TCGGCGACCG AGCCGTCCCC
GCTCCAGCGG ACGACATGCT GAACCACGGC TTTGCCTGCT ACAATCTTTA TTCGACCCGG
GACAAGCGGT ACATGAGCCT TGGCGCGCTG GAACCGCAGT TCTGGAAGGC CTTCTGCGAG
CGTGTGGGAC ACCCGGAATG GGACACTCCA CAGTATTTCG AACCGGGAAG CCACCAGGTC
GAGTTGAAGC ACCGGCTGGA GGCGTTGTTC GCGAGCAGGA CCCGTGCCGA GTGGGTGGAG
GTCTTCAAGG ATGCCGACTG TTGCTGTGAA CCGGTGCTCG ATCTTGCCGA GGTCATGGAC
GATCCCCAGG TGCGGGCGCG AGAAATGGTG GTCGATCTGA TCCATGACAG CTGGGGAGCC
TACCGGCAGC TCGGCATATG CCCCCGACTC TCGAGCACCC CCGGGGGCAT TCGGTCACAT
GCCCCCGAGC TCGGCGAACA CACGGACCGG ATCCTTTGCG GCCTGGGCTA CGATTCGACC
GAGATCGAAA GGCTGCGACG GCAAGGCGTC GTCTGA
|
|---|
| Protein sequence | MQGALCGFTV LDLSRLLPGP FCSMLLADLG ADVIKIEEPG RGDYIRWWPP RVGGGSGYHV
VLNRNKRSLT LNLKAPEGKD IFRSLAKNAD VVLESFRPGV MDKMGLGYER LAAVNPGIVF
CAISGYGAYG PMALKAGHDV NYLARSGVLS YSGRRAPTMT GVQIADLGGG GLPAAFGILA
ALLARTRTGK GQFVDVSMTD GSLLWNCLRW GKLLGDRAVP APADDMLNHG FACYNLYSTR
DKRYMSLGAL EPQFWKAFCE RVGHPEWDTP QYFEPGSHQV ELKHRLEALF ASRTRAEWVE
VFKDADCCCE PVLDLAEVMD DPQVRAREMV VDLIHDSWGA YRQLGICPRL SSTPGGIRSH
APELGEHTDR ILCGLGYDST EIERLRRQGV V
|
|---|
| |